RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SHC2P98077 582 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TRAP1Q12931 704 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ATP1A4Q13733 1029 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR176Q14439 515 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 LRIT3Q3SXY7 679 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TECRLQ5HYJ1 363 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM69BQ5VUD6 431 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RAET1LQ5VY80 246 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 KIAA0895LQ68EN5 471 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 AQP12AQ8IXF9 295 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF676Q8N7Q3 588 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PDPRQ8NCN5 879 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OR10Q1Q8NGQ4 319 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OR8K5Q8NH50 307 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM174AQ8TBP5 190 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 DIO2Q92813 273 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 C3orf49Q96BT1 292 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF778Q96MU6 729 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TPPP3Q9BW30 176 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PCDHB10Q9UN67 800 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 SPO11Q9Y5K1 396 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM265A0A087WTH1 108 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A1W2PRG6 482 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 SOBPA7XYQ1 873 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 WRBO00258 174 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 KLF11O14901 512 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PRKD3O94806 890 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 DRD2P14416 443 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PORP16435 677 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 UQCRC2P22695 453 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 GALNSP34059 522 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RORAP35398 523 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 IL12RB1P42701 662 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PCLAFQ15004 111 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 IRF4Q15306 451 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TRIM61Q5EBN2 209 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RAB41Q5JT25 222 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 C6orf136Q5SQH8 315 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 MANEALQ5VSG8 457 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM53Q6P2H8 277 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 USP30Q70CQ3 517 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 KLHDC8AQ8IYD2 350 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 MINDY2Q8NBR6 621 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ZBTB44Q8NCP5 570 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OR9I1Q8NGQ6 314 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 LRTOMTQ8WZ04 291 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 DHRS4Q9BTZ2 278 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PDCD10Q9BUL8 212 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ZBTB20Q9HC78 741 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TCF7L1Q9HCS4 588 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 GPRC5BQ9NZH0 403 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 IFT52Q9Y366 437 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PCDHGA8Q9Y5G5 932 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 MYH9P35579 1960 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 WASH4PA8MWX3 477 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 EMC8O43402 210 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PDYNP01213 254 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 CSNK1EP49674 416 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RIN1Q13671 783 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 GBX1Q14549 363 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PNCKQ6P2M8 343 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ALKAL1Q6UXT8 129 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 HSD11B1LQ7Z5J1 315 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM173Q86WV6 379 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 EID2Q8N6I1 236 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 NUP43Q8NFH3 380 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OR5AR1Q8NGP9 310 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 NR4A3Q92570 626 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OR1F2PQ96R84 312 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PISDQ9UG56 409 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 LIPT1Q9Y234 373 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 POMPQ9Y244 141 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ITGB4P16144 1822 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 NPIPA2E9PIF3 369 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 NPIPA3F8WFD2 350 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 SNPHO15079 494 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 F11P03951 625 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OSMP13725 252 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 FDXRP22570 491 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 CHMP24386 653 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 AK4P27144 223 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RAB25P57735 213 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 SIM1P81133 766 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 KIR2DS3Q14952 304 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 BTBD16Q32M84 506 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR107Q5VW38 600 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 UBQLNLQ8IYU4 475 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 CLEC1AQ8NC01 280 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 OR4D6Q8NGJ1 314 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ASB15Q8WXK1 588 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 MCHR1Q99705 422 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PBX4Q9BYU1 374 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ASB6Q9NWX5 421 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 LRIT1Q9P2V4 623 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 UPB1Q9UBR1 384 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RPL36Q9Y3U8 105 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 MYOCOSA0A1B0GUC4 107 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PRSS38A1L453 326 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms