RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CNR2P34972 360 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CHI3L1P36222 383 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LIM2P55344 173 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PCBP4P57723 403 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DSTNP60981 165 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TLE2Q04725 743 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KRR1Q13601 381 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 COL9A2Q14055 689 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GRIN2CQ14957 1233 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SUZ12Q15022 739 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TEAD2Q15562 447 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SSX1Q16384 188 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DUSP7Q16829 419 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TIMM50Q3ZCQ8 353 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TRIM60Q495X7 471 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LY6G5CQ5SRR4 150 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MEDAGQ5VYS4 303 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 C12orf73Q69YU5 71 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 REEP3Q6NUK4 255 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TCTN3Q6NUS6 607 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ERAP2Q6P179 960 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LCTLQ6UWM7 567 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ANGPTL8Q6UXH0 198 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GDPGP1Q6ZNW5 385 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM92BQ6ZTR7 304 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PARS2Q7L3T8 475 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PRICKLE2Q7Z3G6 844 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF547Q8IVP9 402 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC44A2Q8IWA5 706 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CFAP206Q8IYR0 622 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ADGRF3Q8IZF5 1079 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TDHQ8IZJ6 230 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LINC00528Q8N1L1 170 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NATD1Q8N6N6 113 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SCAIQ8N9R8 606 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM46DQ8NEK8 389 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GPR32P1Q8NGA4 272 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OR5AK3PQ8NH89 298 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 UTP15Q8TED0 518 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CYB5D2Q8WUJ1 264 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC38A5Q8WUX1 472 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SORCS1Q8WY21 1168 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OR5P2Q8WZ92 322 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PIK3R3Q92569 461 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GTPBP3Q969Y2 492 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OTUB2Q96DC9 234 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TCEAL4Q96EI5 215 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 Q96MT0 163 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OPALINQ96PE5 141 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TRNT1Q96Q11 434 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DEPDC7Q96QD5 511 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MGLLQ99685 303 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CTRCQ99895 268 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CHCHD6Q9BRQ6 235 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 UCK2Q9BZX2 261 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZDHHC5Q9C0B5 715 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZCCHC2Q9C0B9 1178 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 C6orf62Q9GZU0 229 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 RACGAP1Q9H0H5 632 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DPEP2Q9H4A9 486 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MTG2Q9H4K7 406 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 C3orf14Q9HBI5 128 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 HHATLQ9HCP6 504 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLAMF7Q9NQ25 335 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 C11orf16Q9NQ32 467 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CCDC177Q9NQR7 707 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DYRK4Q9NR20 520 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TDP1Q9NUW8 608 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 HCFC1R1Q9NWW0 138 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CLN6Q9NWW5 311 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TAS2R16Q9NYV7 291 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SPATA7Q9P0W8 599 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TBC1D14Q9P2M4 693 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF229Q9UJW7 825 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ACAD8Q9UKU7 415 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 RAB23Q9ULC3 237 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MGAT4BQ9UQ53 548 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CFL2Q9Y281 166 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PCDHGB6Q9Y5F9 930 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KIAA1549LQ6ZVL6 1849 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NUP210Q8TEM1 1887 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TRBV4-1A0A0J9YWV2 114 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LOC100506127A0A0U1RQW1 187 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PNMA8CA0A1B0GUJ8 204 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC35F4A4IF30 521 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SAP18O00422 153 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KMOO15229 486 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CCL16O15467 120 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GDF9O60383 454 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 B4GALT2O60909 372 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ENTPD6O75354 484 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GPX5O75715 221 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MED26O95402 600 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CXCL14O95715 111 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TP53P04637 393 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 XPAP23025 273 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ITGB7P26010 798 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms