RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ZNF763Q0D2J5 394 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PUM1Q14671 1186 aaKnown RBP eCLIP14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CCDC58Q4VC31 144 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PPP2R2DQ66LE6 453 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 ZNF438Q7Z4V0 828 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 ENKURQ8TC29 256 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 HHIPQ96QV1 700 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CMAHPQ9Y471 501 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 V9GYH0 126 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CNTRLQ7Z7A1 2325 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 NCR1O76036 304 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 PSKH1P11801 424 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 SLC7A9P82251 487 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 CNTN1Q12860 1018 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 EIF4HQ15056 248 aaKnown RBP14.57□□□□□ -0.08
CNOT9-208ENST00000542068 GPR155Q7Z3F1 870 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 TMC8Q8IU68 726 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 OR52N2Q8NGI0 321 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 GANCQ8TET4 914 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 GATAD2BQ8WXI9 593 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 YIPF4Q9BSR8 244 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 UCK2Q9BZX2 261 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 RACGAP1Q9H0H5 632 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 IRF2BPLQ9H1B7 796 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.57□□□□□ -0.08
CNOT9-208ENST00000542068 C1GALT1Q9NS00 363 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 ANGPT4Q9Y264 503 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 SDHBP21912 280 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 MYL9P24844 172 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 PPM1AP35813 382 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 GSTM5P46439 218 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 DGKGP49619 791 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 PRKAG1P54619 331 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 ZNF91Q05481 1191 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 SCN1BQ07699 218 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 CDK10Q15131 360 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 GRHL2Q6ISB3 625 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 METTL2BQ6P1Q9 378 aaKnown RBP14.57□□□□□ -0.08
CNOT9-208ENST00000542068 RNF165Q6ZSG1 346 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 ADIPOR2Q86V24 386 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 TMEM80Q96HE8 168 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 SEMA3GQ9NS98 782 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 A3GALT2U3KPV4 340 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 SZT2Q5T011 3432 aa14.57□□□□□ -0.08
CNOT9-208ENST00000542068 CXCL10P02778 98 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 GSTM1P09488 218 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 ALPPL2P10696 532 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CBLP22681 906 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 APEX1P27695 318 aaKnown RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 DSTNP60981 165 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CRTC2Q53ET0 693 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 DCST1Q5T197 706 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 B3GLCTQ6Y288 498 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 METTL3Q86U44 580 aaKnown RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 SFTPA1Q8IWL2 248 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 FAM20CQ8IXL6 584 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 ATP6V1C2Q8NEY4 427 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 FLCNQ8NFG4 579 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 C9orf43Q8TAL5 461 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 C16orf78Q8WTQ4 265 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CHTF18Q8WVB6 975 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 BTN2A2Q8WVV5 523 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CCDC32Q9BV29 185 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 SLC6A16Q9GZN6 736 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 FTSJ1Q9UET6 329 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 PRUNE2Q8WUY3 3088 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 ZAR1LA6NP61 321 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 WASHC1A8K0Z3 465 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 M0R3H8 397 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 NME6O75414 186 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 PCDH8O95206 1070 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 LATS1O95835 1130 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CTSAP10619 480 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 SYN1P17600 705 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 PLEKHS1Q5SXH7 462 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 TTC23LQ6PF05 361 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 WASH2PQ6VEQ5 465 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 SIX5Q8N196 739 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 POF1BQ8WVV4 589 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 EXOSC8Q96B26 276 aaKnown RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 MAPKAP1Q9BPZ7 522 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CDCA4Q9BXL8 241 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 TRPC4Q9UBN4 977 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 VCANP13611 3396 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 SYNDIG1LA6NDD5 238 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 TBC1D3BA6NDS4 549 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 NTN1O95631 604 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 PTPN2P17706 415 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CSTF2P33240 577 aaKnown RBP eCLIP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 IRS1P35568 1242 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CRYBB2P43320 205 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 LARS2Q15031 903 aaKnown RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CLEC12AQ5QGZ9 265 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 HORMAD2Q8N7B1 307 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 ZNF480Q8WV37 535 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CXorf36Q9H7Y0 433 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 KCNK12Q9HB15 430 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 CXXC1Q9P0U4 656 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-208ENST00000542068 SNX7Q9UNH6 387 aa14.56□□□□□ -0.08
CNOT9-208ENST00000542068 A0A1B0GVC2 190 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms