RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ILF2Q12905 390 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 RBM39Q14498 530 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 MXD4Q14582 209 aaPredicted RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 PTGISQ16647 500 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CTU2Q2VPK5 515 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 KRTAP27-1Q3LI81 207 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 KIAA1644Q3SXP7 199 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 MCMDC2Q4G0Z9 681 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CEP55Q53EZ4 464 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 IFI44LQ53G44 452 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 DCAF10Q5QP82 559 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CLVS2Q5SYC1 327 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 LRRC38Q5VT99 294 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ARHGEF16Q5VV41 709 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 PDPK2PQ6A1A2 396 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 SNRNP48Q6IEG0 339 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 ZSCAN25Q6NSZ9 544 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ADAM5Q6NVV9 412 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ARHGAP11AQ6P4F7 1023 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 KIF6Q6ZMV9 814 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 PRSS42Q7Z5A4 293 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 GPR142Q7Z601 462 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 AMIGO1Q86WK6 493 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 NUDT13Q86X67 352 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 PLA2G4DQ86XP0 818 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ERO1BQ86YB8 467 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CLVS1Q8IUQ0 354 aaPredicted RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 KLHDC8AQ8IYD2 350 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ARHGAP24Q8N264 748 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 RASGEF1AQ8N9B8 481 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ZNF383Q8NA42 475 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 TTLQ8NG68 377 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 HCAR2Q8TDS4 363 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 DDI1Q8WTU0 396 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CKAP2Q8WWK9 683 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 SLC13A3Q8WWT9 602 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 HSD17B8Q92506 261 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 RAPGEF5Q92565 580 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 PROX1Q92786 737 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 P2RX5Q93086 422 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 WBP2Q969T9 261 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 SGF29Q96ES7 293 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 MSANTD3Q96H12 275 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CDKN2AIPNLQ96HQ2 116 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 IFT74Q96LB3 600 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 FAM20AQ96MK3 541 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 TSNARE1Q96NA8 513 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 TTC25Q96NG3 672 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 USP28Q96RU2 1077 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 RAD9AQ99638 391 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ATG101Q9BSB4 218 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 PRRG4Q9BZD6 226 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 BARHL1Q9BZE3 327 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 OSBPL8Q9BZF1 889 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 SNX25Q9H3E2 840 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 XKR8Q9H6D3 395 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ZNF696Q9H7X3 374 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 DNAJC4Q9NNZ3 241 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 SCRT2Q9NQ03 307 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 GSN-AS1Q9NRJ2 163 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 GKN1Q9NS71 199 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 DNAJC11Q9NVH1 559 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 FLRT3Q9NZU0 649 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 B3GAT1Q9P2W7 334 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 LRWD1Q9UFC0 647 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 CD300AQ9UGN4 299 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ATP6V1HQ9UI12 483 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 ZDHHC2Q9UIJ5 367 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 GMEB2Q9UKD1 530 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 GPR132Q9UNW8 380 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 TDRKHQ9Y2W6 561 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 HBS1LQ9Y450 684 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 TOP2AP11388 1531 aaKnown RBP2.92□□□□□ -1.94
USP28-210ENST00000542033 CDHR2Q9BYE9 1310 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 STK36Q9NRP7 1315 aa2.92□□□□□ -1.94
USP28-210ENST00000542033 AK9Q5TCS8 1911 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 REREQ9P2R6 1566 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PLB1Q6P1J6 1458 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FGD5Q6ZNL6 1462 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ARAP1Q96P48 1450 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FANCD2Q9BXW9 1451 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 HECW1Q76N89 1606 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PTPN23Q9H3S7 1636 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 A0A0A6YYC8 382 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 IGLV9-49A0A0B4J1Y8 123 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 A0A1W2PN81 502 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 A0A1W2PPK0 400 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 HEATR9A2RTY3 570 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SLCO1B7G3V0H7 640 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 I3L1I5 382 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 FBP2O00757 339 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ALOX15BO15296 676 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 RAD51BO15315 384 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ATP6V0E1O15342 81 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ECE2O60344 883 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ATP9AO75110 1047 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 GMNNO75496 209 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PRDM1O75626 825 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ATP6AP2O75787 350 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 GLCEO94923 617 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms