RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CA5AP35218 305 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 HMGA2P52926 109 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 SNRPGP62308 76 aaKnown RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 ST3GAL4Q11206 333 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 MRPL28Q13084 256 aaKnown RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 TARDBPQ13148 414 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZNF177Q13360 481 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 PTGR1Q14914 329 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 TRIP6Q15654 476 aaKnown RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 NDUFA9Q16795 377 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 SYT16Q17RD7 645 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 MICAQ29983 383 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZNF630Q2M218 657 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 GPAT3Q53EU6 434 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CCDC157Q569K6 752 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CTSL3PQ5NE16 218 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 LCN1P1Q5VSP4 162 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 PEAR1Q5VY43 1037 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 PLET1Q6UQ28 207 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 SCIMPQ6UWF3 145 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZNF782Q6ZMW2 699 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 NUDT18Q6ZVK8 323 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 IKBIPQ70UQ0 350 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZBTB46Q86UZ6 589 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 RDH10Q8IZV5 341 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CFAP52Q8N1V2 620 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZNF366Q8N895 744 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CEP76Q8TAP6 659 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ENKURQ8TC29 256 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZFAND1Q8TCF1 268 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 WFDC5Q8TCV5 224 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 SETD7Q8WTS6 366 aaKnown RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 GEMIN6Q8WXD5 167 aaKnown RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 JPH3Q8WXH2 748 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 KLHL6Q8WZ60 621 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 NR4A3Q92570 626 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ALG14Q96F25 216 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 TOE1Q96GM8 510 aaKnown RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 PPP1R16AQ96I34 528 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 MRGPRX1Q96LB2 322 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 HYLS1Q96M11 299 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 GPR63Q9BZJ6 419 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 TRIM8Q9BZR9 551 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 NT5DC2Q9H857 520 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 SERHLQ9NQF3 203 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 NDFIP2Q9NV92 336 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 RABL2AQ9UBK7 228 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 CLEC4EQ9ULY5 219 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 RABL2BQ9UNT1 228 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 KCTD3Q9Y597 815 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 PCDHGB7Q9Y5F8 929 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 OR51B4Q9Y5P0 310 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 STON1Q9Y6Q2 735 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CELSR3Q9NYQ7 3312 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 LOC100506127A0A0U1RQW1 187 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 KRT87PA6NCN2 255 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 ZNF670-ZNF695F2Z2N8 137 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 DSCR3O14972 297 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 ORC5O43913 435 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 NIPSNAP2O75323 286 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CYP7B1O75881 506 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CCNB2O95067 398 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CRYZL1O95825 349 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 C1QBP02746 253 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 SYPP08247 313 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 FTH1P19P0C7X4 201 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CR2P20023 1033 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CHMP24386 653 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 TNFSF8P32971 234 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 NSG1P42857 185 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CSNK1DP48730 415 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 HSPA7P48741 367 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 AP2S1P53680 142 aaPredicted RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 PPP3R1P63098 170 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 MLLT11Q13015 90 aaPredicted RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 TNK1Q13470 666 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 LAPTM5Q13571 262 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 TBRG1Q3YBR2 411 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 KLHL22Q53GT1 634 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 SPIN4Q56A73 249 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 YIF1BQ5BJH7 314 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CARD16Q5EG05 197 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 UNC5DQ6UXZ4 953 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 IDO2Q6ZQW0 420 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CIR1Q86X95 450 aaPredicted RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 NAXDQ8IW45 347 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 HS3ST5Q8IZT8 346 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 OXR1Q8N573 874 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 C19orf18Q8NEA5 215 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 PROKR2Q8NFJ6 384 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 OR10G2Q8NGC3 310 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 BTN2A2Q8WVV5 523 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 DNAJA4Q8WW22 397 aaPredicted RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 ASB15Q8WXK1 588 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 SLC7A6Q92536 515 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 MTERF3Q96E29 417 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 GABRG3Q99928 467 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CHCHD6Q9BRQ6 235 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms