RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 GBP6Q6ZN66 633 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ASPGQ86U10 573 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 HOOK3Q86VS8 718 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 SIAH3Q8IW03 269 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 OR8H3Q8N146 312 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 GVQW1Q8N7I0 195 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 CCDC197Q8NCU1 140 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 FLVCR1-AS1Q8TAF5 88 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 RANBP9Q96S59 729 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 SSX3Q99909 188 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ZNF446Q9NWS9 450 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 PSORS1C1Q9UIG5 152 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ODF2LQ9ULJ1 636 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 CELA1Q9UNI1 258 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 RAD54L2Q9Y4B4 1467 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 A0A1W2PNU3 283 aaPredicted RBP4.43□□□□□ -1.7
YBX3-210ENST00000540975 MPHOSPH10O00566 681 aaKnown RBP4.43□□□□□ -1.7
YBX3-210ENST00000540975 GLCEO94923 617 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 EPOP01588 193 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 UMPSP11172 480 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 NEFHP12036 1026 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 FOSL2P15408 326 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 TRA2BP62995 288 aaKnown RBP4.43□□□□□ -1.7
YBX3-210ENST00000540975 ABRAXAS2Q15018 415 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 MEP1BQ16820 701 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 CCDC158Q5M9N0 1113 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 KRT77Q7Z794 578 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 C17orf64Q86WR6 236 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 THEM5Q8N1Q8 247 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 GOT1L1Q8NHS2 421 aaPredicted RBP4.43□□□□□ -1.7
YBX3-210ENST00000540975 ESAMQ96AP7 390 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 ZBP1Q9H171 429 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 ALDH8A1Q9H2A2 487 aaPredicted RBP4.43□□□□□ -1.7
YBX3-210ENST00000540975 PEG3Q9GZU2 1588 aa4.43□□□□□ -1.7
YBX3-210ENST00000540975 DUSP11O75319 330 aaKnown RBP4.42□□□□□ -1.7
YBX3-210ENST00000540975 CRCPO75575 148 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 PAX7P23759 505 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 IST1P53990 364 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 HMGCS2P54868 508 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 LCP2Q13094 533 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 CRMP1Q14194 572 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 MEF2DQ14814 521 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 HSP90B2PQ58FF3 399 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 MARC1Q5VT66 337 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 C11orf42Q8N5U0 333 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 TRPV3Q8NET8 790 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 GGHQ92820 318 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 MRPL24Q96A35 216 aaKnown RBP4.42□□□□□ -1.7
YBX3-210ENST00000540975 ULK4Q96C45 1275 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 C16orf58Q96GQ5 468 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 UTP14AQ9BVJ6 771 aaKnown RBP4.42□□□□□ -1.7
YBX3-210ENST00000540975 ZNF350Q9GZX5 532 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 DPEP3Q9H4B8 488 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 ZDHHC6Q9H6R6 413 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 BAZ1AQ9NRL2 1556 aaPredicted RBP4.42□□□□□ -1.7
YBX3-210ENST00000540975 ERVK-19Q9WJR5 959 aa4.42□□□□□ -1.7
YBX3-210ENST00000540975 UNC13AQ9UPW8 1703 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 ZNF487B1APH4 448 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 CHUKO15111 745 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 CTAGE5O15320 804 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 LRRTM2O43300 516 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 CPNE6O95741 557 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 HSP90AB1P08238 724 aaKnown RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 EZRP15311 586 aaKnown RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 GPX3P22352 226 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 ST8SIA6P61647 398 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 NDPQ00604 133 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 WASHC5Q12768 1159 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 FAM133BQ5BKY9 247 aaKnown RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 PAMR1Q6UXH9 720 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 CCDC73Q6ZRK6 1079 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 WDR49Q8IV35 697 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 NAXDQ8IW45 347 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 LAX1Q8IWV1 398 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 ZNF491Q8N8L2 437 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 OR1K1Q8NGR3 316 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 MCCC1Q96RQ3 725 aaPredicted RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 CXXC4Q9H2H0 198 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 RRAGDQ9NQL2 400 aaPredicted RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 DNAJC17Q9NVM6 304 aaKnown RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 SUN2Q9UH99 717 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 LEF1Q9UJU2 399 aaPredicted RBP4.41□□□□□ -1.7
YBX3-210ENST00000540975 ITM2BQ9Y287 266 aa4.41□□□□□ -1.7
YBX3-210ENST00000540975 TNIKQ9UKE5 1360 aa4.4□□□□□ -1.7
YBX3-210ENST00000540975 PRRC2AP48634 2157 aaKnown RBP4.4□□□□□ -1.7
YBX3-210ENST00000540975 FAM149AA5PLN7 773 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 ERICH4A6NGS2 130 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 TRIM64CA6NLI5 447 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 RNF212BA8MTL3 300 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 MTIF2P46199 727 aaKnown RBP4.4□□□□□ -1.71
YBX3-210ENST00000540975 GSTO1P78417 241 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 DMTNQ08495 405 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 SCARB2Q14108 478 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 EMC2Q15006 297 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 RSBN1Q5VWQ0 802 aaPredicted RBP4.4□□□□□ -1.71
YBX3-210ENST00000540975 OTOAQ7RTW8 1153 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 CHCHD4Q8N4Q1 142 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 GOLGA5Q8TBA6 731 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms