RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CLMPQ9H6B4 373 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 TRIM45Q9H8W5 580 aaPredicted RBP15.71■□□□□ 0.11
CD9-209ENST00000540891 LIN28AQ9H9Z2 209 aaKnown RBP15.71■□□□□ 0.11
CD9-209ENST00000540891 SENP1Q9P0U3 644 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 ABI3Q9P2A4 366 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 MCM8Q9UJA3 840 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 CES1P1Q9UKY3 287 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 PCDHA9Q9Y5H5 950 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 TENM4Q6N022 2769 aa15.71■□□□□ 0.11
CD9-209ENST00000540891 CCDC151A5D8V7 595 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 RGS16O15492 202 aaPredicted RBP15.7■□□□□ 0.1
CD9-209ENST00000540891 VPS4BO75351 444 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 ZIC2O95409 532 aaPredicted RBP15.7■□□□□ 0.1
CD9-209ENST00000540891 TRHRP34981 398 aaPredicted RBP15.7■□□□□ 0.1
CD9-209ENST00000540891 TRA2BP62995 288 aaKnown RBP15.7■□□□□ 0.1
CD9-209ENST00000540891 SPRED3Q2MJR0 410 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 ZNF750Q32MQ0 723 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 ZNF766Q5HY98 468 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 CLEC6AQ6EIG7 209 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 SLC48A1Q6P1K1 146 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 TRIM46Q7Z4K8 759 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 SCMH1Q96GD3 660 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 RBM18Q96H35 190 aaKnown RBP15.7■□□□□ 0.1
CD9-209ENST00000540891 TRMOQ9BU70 441 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 SIRT5Q9NXA8 310 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 LRFN1Q9P244 771 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 VPS4AQ9UN37 437 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 CCL27Q9Y4X3 112 aa15.7■□□□□ 0.1
CD9-209ENST00000540891 UBR5O95071 2799 aaPredicted RBP15.7■□□□□ 0.1
CD9-209ENST00000540891 C1orf226A1L170 272 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 CDK2AP1O14519 115 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 PCDH7O60245 1069 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 ITGA10O75578 1167 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 CBX6O95503 412 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 CLPSP04118 112 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 CHRNGP07510 517 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 SLC35E2P0CK97 266 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 UROSP10746 265 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 COX7A2P14406 83 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 ARRB2P32121 409 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 HK2P52789 917 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 RNF4P78317 190 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 OC90Q02509 493 aaPredicted RBP15.69■□□□□ 0.1
CD9-209ENST00000540891 SRSF1Q07955 248 aaKnown RBP eCLIP15.69■□□□□ 0.1
CD9-209ENST00000540891 MRPL49Q13405 166 aaKnown RBP15.69■□□□□ 0.1
CD9-209ENST00000540891 INAQ16352 499 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 SPIN4Q56A73 249 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 BEND6Q5SZJ8 279 aaPredicted RBP15.69■□□□□ 0.1
CD9-209ENST00000540891 ZNF324BQ6AW86 544 aaPredicted RBP15.69■□□□□ 0.1
CD9-209ENST00000540891 GALNT18Q6P9A2 607 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 HSDL2Q6YN16 418 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 ZCCHC23Q6ZST2 131 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 OR4K14Q8NGD5 310 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 OR6Y1Q8NGX8 325 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 OR8K3Q8NH51 312 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 SUN3Q8TAQ9 357 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 FAR1Q8WVX9 515 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 SREK1Q8WXA9 508 aaKnown RBP15.69■□□□□ 0.1
CD9-209ENST00000540891 FBXL20Q96IG2 436 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 PELOQ9BRX2 385 aaKnown RBP15.69■□□□□ 0.1
CD9-209ENST00000540891 MYOTQ9UBF9 498 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 HEY2Q9UBP5 337 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 PCDHGB6Q9Y5F9 930 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 PTGDR2Q9Y5Y4 395 aa15.69■□□□□ 0.1
CD9-209ENST00000540891 FCHO1O14526 889 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 AZIN1O14977 448 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 NPHS1O60500 1241 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 ZNF354AO60765 605 aaPredicted RBP15.68■□□□□ 0.1
CD9-209ENST00000540891 GUCY1B2O75343 617 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 CRCPO75575 148 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 BPGMP07738 259 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 PIK3R1P27986 724 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 TIA1P31483 386 aaKnown RBP eCLIP15.68■□□□□ 0.1
CD9-209ENST00000540891 GALNSP34059 522 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 CYB561P49447 251 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 HLCSP50747 726 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 ERVK-8P63133 956 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 PMP22Q01453 160 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 DUSP2Q05923 314 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 BTKQ06187 659 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 ACSM2AQ08AH3 577 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 NR6A1Q15406 480 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 ARL13AQ5H913 290 aaPredicted RBP15.68■□□□□ 0.1
CD9-209ENST00000540891 ACSM2BQ68CK6 577 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 LRIG3Q6UXM1 1119 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 C9orf40Q8IXQ3 194 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 RIT1Q92963 219 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 EBPLQ9BY08 206 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 TUBB1Q9H4B7 451 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 SSU72Q9NP77 194 aaKnown RBP15.68■□□□□ 0.1
CD9-209ENST00000540891 KLHL1Q9NR64 748 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 AGPAT4Q9NRZ5 378 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 ERVK-19Q9WJR5 959 aa15.68■□□□□ 0.1
CD9-209ENST00000540891 CLEC18AA5D8T8 446 aa15.67■□□□□ 0.1
CD9-209ENST00000540891 TMEM233B4DJY2 109 aa15.67■□□□□ 0.1
CD9-209ENST00000540891 WWP2O00308 870 aa15.67■□□□□ 0.1
CD9-209ENST00000540891 CTIFO43310 598 aaKnown RBP15.67■□□□□ 0.1
CD9-209ENST00000540891 OR10H2O60403 315 aa15.67■□□□□ 0.1
CD9-209ENST00000540891 OR2J2O76002 312 aa15.67■□□□□ 0.1
CD9-209ENST00000540891 RSL1D1O76021 490 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms