RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 KCNJ9Q92806 393 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 MARS2Q96GW9 593 aaKnown RBP9.03□□□□□ -0.96
CLIP1-214ENST00000540539 PPM1MQ96MI6 270 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 MS4A4EQ96PG1 132 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 TAAR1Q96RJ0 339 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 SOSTQ9BQB4 213 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 C7orf50Q9BRJ6 194 aaKnown RBP9.03□□□□□ -0.96
CLIP1-214ENST00000540539 TWSG1Q9GZX9 223 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ENKD1Q9H0I2 346 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 METTL9Q9H1A3 318 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 GORASP2Q9H8Y8 452 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ANKRA2Q9H9E1 313 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 GKN1Q9NS71 199 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ZFP57Q9NU63 452 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 SH3BP4Q9P0V3 963 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 WASF3Q9UPY6 502 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 CXorf65A6NEN9 183 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 TOX3O15405 576 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-214ENST00000540539 VPS4BO75351 444 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 DGAT1O75907 488 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 HPP00738 406 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 FGF4P08620 206 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ADRA2AP08913 450 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ITGA3P26006 1051 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ZP1P60852 638 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 CYP24A1Q07973 514 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 CCDC157Q569K6 752 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 CARD16Q5EG05 197 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 LIPNQ5VXI9 398 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ANKS6Q68DC2 871 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ZCCHC12Q6PEW1 402 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 PGAP1Q75T13 922 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 WDTC1Q8N5D0 677 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ZNF383Q8NA42 475 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 CYP2W1Q8TAV3 490 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 GATAD2BQ8WXI9 593 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ARMC5Q96C12 935 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ZNF707Q96C28 371 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-214ENST00000540539 LRR1Q96L50 414 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 YIPF4Q9BSR8 244 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 B3GNT5Q9BYG0 378 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 SAP130Q9H0E3 1048 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 CRISPLD1Q9H336 500 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 APOBEC3GQ9HC16 384 aaKnown RBP9.03□□□□□ -0.96
CLIP1-214ENST00000540539 HHATLQ9HCP6 504 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 LEF1Q9UJU2 399 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-214ENST00000540539 PLEKHM1Q9Y4G2 1056 aa9.03□□□□□ -0.96
CLIP1-214ENST00000540539 ZCWPW2A0A1B0GU75 182 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 A0A1W2PPE3 182 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 SMIM30A4D0T7 59 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 A6NCN8 305 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 A8MT66 165 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 L7N2F9 121 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CASC3O15234 703 aaKnown RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 RAD1O60671 282 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CDRT1O95170 752 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 STBD1O95210 358 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 VTNP04004 478 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 ALDOBP05062 364 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 ALPIP09923 528 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CBSLP0DN79 551 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 GJA1P17302 382 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 MST1P26927 711 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CCR7P32248 378 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CBSP35520 551 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 SOX3P41225 446 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 OR1G1P47890 313 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 SYTL3Q4VX76 610 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 ARHGAP15Q53QZ3 475 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 RAB6CQ53S08 254 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 MLIPQ5VWP3 458 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CDPF1Q6NVV7 123 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM91Q6ZNR0 172 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 Q6ZPB1 254 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 LHFPL3Q86UP9 236 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CDKL3Q8IVW4 592 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 SVBPQ8N300 66 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 BMPERQ8N8U9 685 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 TSPEARQ8WU66 669 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 SLAMF9Q96A28 289 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 CCDC115Q96NT0 180 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 EDEM2Q9BV94 578 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 RAB6CQ9H0N0 254 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 REEP4Q9H6H4 257 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 METTL17Q9H7H0 456 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 MPP6Q9NZW5 540 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 TP53TG5Q9Y2B4 290 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 TRPV2Q9Y5S1 764 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 THSD7BQ9C0I4 1608 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 RFPL4AA6NLU0 287 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 RFPL4AL1F8VTS6 287 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
CLIP1-214ENST00000540539 IFNGP01579 166 aa9.02□□□□□ -0.97
CLIP1-214ENST00000540539 HGFP14210 728 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms