RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TBC1D3FA6NER0 549 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3LB9A6J9 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 GNB5O14775 395 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 HCN1O60741 890 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 EGFP01133 1207 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3HP0C7X1 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ANXA8P13928 327 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 LHCGRP22888 699 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CSTF2P33240 577 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDB1-217ENST00000540166 AGTR2P50052 363 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CDH12P55289 794 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 FOXK2Q01167 660 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ZNF33AQ06730 810 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TSC22D1Q15714 1073 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3GQ6DHY5 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 NADSYN1Q6IA69 706 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3CQ6IPX1 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3Q8IZP1 549 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 DNAJC22Q8N4W6 341 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CHFRQ96EP1 664 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 LINGO1Q96FE5 620 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 UBXN10Q96LJ8 280 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 COQ10AQ96MF6 247 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TRAF4Q9BUZ4 470 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 EDEM2Q9BV94 578 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CINPQ9BW66 212 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 RBCK1Q9BYM8 510 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.3□□□□□ -1.081e-6■□□□□ 8.7
DDB1-217ENST00000540166 HCN2Q9UL51 889 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 EDARQ9UNE0 448 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CCL26Q9Y258 94 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 VPS9D1Q9Y2B5 631 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ZNF175Q9Y473 711 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 OR5K3A6NET4 321 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 I6L893 689 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 M0R082 166 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 BET1O15155 118 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 MPZL2O60487 215 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 LMAN2Q12907 356 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 OR4D1Q15615 310 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 BCL2L15Q5TBC7 163 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ATG9BQ674R7 924 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TEX261Q6UWH6 196 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 Q6ZPB1 254 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 SNX20Q7Z614 316 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ENTHD1Q8IYW4 607 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 WFIKKN2Q8TEU8 576 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 HSH2DQ96JZ2 352 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CCDC115Q96NT0 180 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 SPNS1Q9H2V7 528 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 LRTM1Q9HBL6 345 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TREX1Q9NSU2 369 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TMEFF2Q9UIK5 374 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 U3KQ87 197 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ARNTLO00327 626 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 SLC28A1O00337 649 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 KPNA3O00505 521 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 RAB3AP20336 220 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ALAS2P22557 587 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 MAPK1P28482 360 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ETV6P41212 452 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 KIR2DL3P43628 341 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 RFX2P48378 723 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 PER3P56645 1201 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 KCNC3Q14003 757 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 SPHARQ15513 63 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 GTDC1Q4AE62 458 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 CDKL4Q5MAI5 379 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 FAM46CQ5VWP2 391 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 LIPKQ5VXJ0 399 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CIR1Q86X95 450 aaPredicted RBP8.3□□□□□ -1.08
DDB1-217ENST00000540166 SLC22A8Q8TCC7 542 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 MBD2Q9UBB5 411 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TLR6Q9Y2C9 796 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 CENPFP49454 3210 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 C1QTNF3-AMACRE9PGA6 284 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GABRDO14764 452 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 KCNJ13O60928 360 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 ALPPP05187 535 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 FGF1P05230 155 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 PRDX3P30048 256 aaKnown RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 RPS19P39019 145 aaKnown RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 RGS4P49798 205 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GBX2P52951 348 aaPredicted RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 GPR85P60893 370 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 HMGCS1Q01581 520 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 C22orf42Q6IC83 251 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 VTCN1Q7Z7D3 282 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GALNT10Q86SR1 603 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GPALPP1Q8IXQ4 340 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 KIAA1191Q96A73 305 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 C11orf24Q96F05 449 aaPredicted RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 SCRN2Q96FV2 425 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 ZNF578Q96N58 590 aaPredicted RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 GPR63Q9BZJ6 419 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 CHIAQ9BZP6 476 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms