RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 TRIM63Q969Q1 353 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 MAP6Q96JE9 813 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 CXorf36Q9H7Y0 433 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 UGDHO60701 494 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GPR37L1O60883 481 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GALTP07902 379 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SDHBP21912 280 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ALDH9A1P49189 494 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SPIN4Q56A73 249 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM26DQ5JW98 314 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 PLEKHS1Q5SXH7 462 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ACSM5Q6NUN0 579 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC7A13Q8TCU3 470 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 C16orf78Q8WTQ4 265 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC38A5Q8WUX1 472 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 OTUB1Q96FW1 271 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC6A16Q9GZN6 736 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 BRF2Q9HAW0 419 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 MAT2BQ9NZL9 334 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ATP6V1HQ9UI12 483 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 KCND3Q9UK17 655 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 RPL36Q9Y3U8 105 aaKnown RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 DNAH14Q0VDD8 3507 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 A0A1W2PQ72 361 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 A0A1W2PRB8 838 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 PLOD3O60568 738 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GSTM5P46439 218 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 MAP2K3P46734 347 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 PTPN5P54829 565 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 FABP5Q01469 135 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ALDH6A1Q02252 535 aaKnown RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SP140Q13342 867 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ILKQ13418 452 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 C1DQ13901 141 aaKnown RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 CCDC85BQ15834 202 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF630Q2M218 657 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 C12orf73Q69YU5 71 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 Q6ZVL8 140 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 TRIM69Q86WT6 500 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GDPD1Q8N9F7 314 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 CHST14Q8NCH0 376 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 MED30Q96HR3 178 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 LRR1Q96L50 414 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GPA33Q99795 319 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC23A1Q9UHI7 598 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 TET1Q8NFU7 2136 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SHISA3A0PJX4 238 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 DVL2O14641 736 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 OR2B3O76000 313 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 NTN1O95631 604 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 IL1AP01583 271 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 IL3P08700 152 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 OR12D1P0DN82 309 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 IFNA8P32881 189 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 DSTNP60981 165 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SYT14P1Q58G82 188 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF628Q5EBL2 1059 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 DCST1Q5T197 706 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 LCN1P1Q5VSP4 162 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 USP45Q70EL2 814 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 C2orf73Q8N5S3 287 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ASZ1Q8WWH4 475 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 NRTNQ99748 197 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF717Q9BY31 904 aaPredicted RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 SUV39H2Q9H5I1 410 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 TEKT2Q9UIF3 430 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ANGPT4Q9Y264 503 aa13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 GOLGA4Q13439 2230 aaKnown RBP13.23□□□□□ -0.29
SCNN1A-215ENST00000540037 ANAPC1Q9H1A4 1944 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 LOC105371267A0A1B0GV96 52 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 SCO1O75880 301 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 ADAP00813 363 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 GSTM1P09488 218 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 CPN2P22792 545 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 ERP29P30040 261 aaKnown RBP13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 ETV3P41162 512 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC9A3P48764 834 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 COL9A2Q14055 689 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 LRRC32Q14392 662 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 POM121L1PQ3SYA9 428 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 WDR45BQ5MNZ6 344 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 MEDAGQ5VYS4 303 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 UNC5DQ6UXZ4 953 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 HSD11B1LQ7Z5J1 315 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM145Q8NBT3 493 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 LYSMD1Q96S90 227 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms