RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PTGDR2Q9Y5Y4 395 aa17.02■□□□□ 0.32
SNRPA1-203ENST00000540017 UBR5O95071 2799 aaPredicted RBP17.02■□□□□ 0.31
SNRPA1-203ENST00000540017 CCDC151A5D8V7 595 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 TCP11X1B4DZS4 312 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 H3BQF6 201 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 PRAMEF2O60811 474 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 IGKV3-11P04433 115 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 BPGMP07738 259 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 UROSP10746 265 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 PLIN5Q00G26 463 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 KCNC4Q03721 635 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 SRSF11Q05519 484 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 MPP2Q14168 576 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 OR1C1Q15619 314 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 CES4AQ5XG92 561 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 RPUSD3Q6P087 351 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 LRIG3Q6UXM1 1119 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 TRIM46Q7Z4K8 759 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 GRHL3Q8TE85 626 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 SENP5Q96HI0 755 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 ABI3Q9P2A4 366 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 HEY2Q9UBP5 337 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 MCM8Q9UJA3 840 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 CCL27Q9Y4X3 112 aa17.01■□□□□ 0.31
SNRPA1-203ENST00000540017 TMEM233B4DJY2 109 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 CTIFO43310 598 aaKnown RBP17■□□□□ 0.31
SNRPA1-203ENST00000540017 PCDH7O60245 1069 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 NPHS1O60500 1241 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 CRCPO75575 148 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 ITGA10O75578 1167 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 NEURL1O76050 574 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 ZFAND5O76080 213 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 SLC35E2P0CK97 266 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 COX7A2P14406 83 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 GNLYP22749 145 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 PIK3R1P27986 724 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 OC90Q02509 493 aaPredicted RBP17■□□□□ 0.31
SNRPA1-203ENST00000540017 ACSM2AQ08AH3 577 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 ASPHQ12797 758 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 BIKQ13323 160 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 SPIN4Q56A73 249 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 ARL13AQ5H913 290 aaPredicted RBP17■□□□□ 0.31
SNRPA1-203ENST00000540017 ZNF766Q5HY98 468 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 ACSM2BQ68CK6 577 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 SLC48A1Q6P1K1 146 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 GALNT18Q6P9A2 607 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 HSDL2Q6YN16 418 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 GALNT11Q8NCW6 608 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 OR4K14Q8NGD5 310 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 OR6Y1Q8NGX8 325 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 PGM2Q96G03 612 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 PKNOX2Q96KN3 472 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 TRMOQ9BU70 441 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 EBPLQ9BY08 206 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 TUBB1Q9H4B7 451 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 SSU72Q9NP77 194 aaKnown RBP17■□□□□ 0.31
SNRPA1-203ENST00000540017 KLHL1Q9NR64 748 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 FIS1Q9Y3D6 152 aa17■□□□□ 0.31
SNRPA1-203ENST00000540017 C1orf226A1L170 272 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 AZIN1O14977 448 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 OR10H2O60403 315 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 ZNF354AO60765 605 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 GUCY1B2O75343 617 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 VPS4BO75351 444 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 ERLIN1O75477 346 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 OR2J2O76002 312 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 CLPSP04118 112 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 IL3P08700 152 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 CT62P0C5K7 136 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 TIA1P31483 386 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 TRHRP34981 398 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 HLCSP50747 726 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 XKP51811 444 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 HK2P52789 917 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 TRA2BP62995 288 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 RNF4P78317 190 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 DUSP2Q05923 314 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 MRPL49Q13405 166 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 ZNF267Q14586 743 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 NR6A1Q15406 480 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 UGT3A2Q3SY77 523 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 SPDYAQ5MJ70 313 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 KANK2Q63ZY3 851 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 FAM180BQ6P0A1 224 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 C9orf40Q8IXQ3 194 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 C7orf57Q8NEG2 295 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 C16orf78Q8WTQ4 265 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 RIT1Q92963 219 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 SCMH1Q96GD3 660 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 FBXL20Q96IG2 436 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 CLMPQ9H6B4 373 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 TRIM45Q9H8W5 580 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 CXorf21Q9HAI6 301 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 SIRT5Q9NXA8 310 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 LRFN1Q9P244 771 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 MYOTQ9UBF9 498 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 VPS4AQ9UN37 437 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 DLGAP4Q9Y2H0 992 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms