RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NOL11Q9H8H0 719 aaKnown RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 ZNF223Q9UK11 482 aaPredicted RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 ZNF490Q9ULM2 529 aaPredicted RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 STK38LQ9Y2H1 464 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 TSC22D4Q9Y3Q8 395 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 PCDHGA11Q9Y5H2 935 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 TRBV11-1A0A0K0K1C0 115 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 FOXO6A8MYZ6 492 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 H0YIV9 168 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 DLX3O60479 287 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 PLIN3O60664 434 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 PRMT3O60678 531 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 CLDN9O95484 217 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 OTCP00480 354 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 PROCP04070 461 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 PCNAP12004 261 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 CD1EP15812 388 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 MSX1P28360 303 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 CYB561P49447 251 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 PRKAA2P54646 552 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 DLX5P56178 289 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 RAB8AP61006 207 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 NAA20P61599 178 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 CEBPEQ15744 281 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 ADPRMQ3LIE5 342 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 GGTA1PQ4G0N0 100 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 ZNF678Q5SXM1 525 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 C10orf62Q5T681 223 aaPredicted RBP13.88□□□□□ -0.19
USB1-203ENST00000539737 TRIM40Q6P9F5 258 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 ZYG11AQ6WRX3 759 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 VN1R5Q7Z5H4 357 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 LIX1LQ8IVB5 337 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 CCDC63Q8NA47 563 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 SRFBP1Q8NEF9 429 aaKnown RBP13.88□□□□□ -0.19
USB1-203ENST00000539737 NFAM1Q8NET5 270 aaPredicted RBP13.88□□□□□ -0.19
USB1-203ENST00000539737 OR7G3Q8NG95 312 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 TMEM237Q96Q45 408 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 CENPKQ9BS16 269 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 NTMT1Q9BV86 223 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 REXO4Q9GZR2 422 aaKnown RBP13.88□□□□□ -0.19
USB1-203ENST00000539737 PNPLA3Q9NST1 481 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 EMCNQ9ULC0 261 aa13.88□□□□□ -0.19
USB1-203ENST00000539737 PHF3Q92576 2039 aaKnown RBP13.88□□□□□ -0.19
USB1-203ENST00000539737 A0A0G2JN53 185 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 LRIT2A6NDA9 550 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 NPIPA2E9PIF3 369 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 NPIPA3F8WFD2 350 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 TGFBR3LH3BV60 316 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 CDK2AP1O14519 115 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 OR7A17O14581 309 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 ERI3O43414 337 aaKnown RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 HNRNPH1P31943 449 aaKnown RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 PIK3CBP42338 1070 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 HLCSP50747 726 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 FOXD4Q12950 439 aaPredicted RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 TRAF3Q13114 568 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 RCN2Q14257 317 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 TMEM35AQ53FP2 167 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 LRIG3Q6UXM1 1119 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 QSOX2Q6ZRP7 698 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 ZZZ3Q8IYH5 903 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 OR2L5Q8NG80 312 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 OR52B6Q8NGF0 335 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 LILRB4Q8NHJ6 448 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 ZNF473Q8WTR7 871 aaKnown RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 MS4A6EQ96DS6 147 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 L3HYPDHQ96EM0 354 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 CMTM7Q96FZ5 175 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 NSUN5Q96P11 429 aaKnown RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 SMC6Q96SB8 1091 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 SMR3AQ99954 134 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 MS4A8Q9BY19 250 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 ROGDIQ9GZN7 287 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 AICDAQ9GZX7 198 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 KLHL31Q9H511 634 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 COPS7BQ9H9Q2 264 aaPredicted RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 ZBTB26Q9HCK0 441 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 SEMA4BQ9NPR2 832 aaPredicted RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 MRPS33Q9Y291 106 aaKnown RBP13.87□□□□□ -0.19
USB1-203ENST00000539737 PLEKHA6Q9Y2H5 1048 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 ABCA2Q9BZC7 2435 aa13.87□□□□□ -0.19
USB1-203ENST00000539737 SYNDIG1LA6NDD5 238 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 SAGE2PA6NJ88 616 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 CLDN4O14493 209 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 RGS16O15492 202 aaPredicted RBP13.86□□□□□ -0.19
USB1-203ENST00000539737 SUPT7LO94864 414 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 CELA3AP09093 270 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 SMIM10L1P0DMW3 83 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 KLK2P20151 261 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 IMPDH1P20839 514 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 CHRNB4P30926 498 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 BTN3A2P78410 334 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 CLCQ05315 142 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 DDX39BQ13838 428 aaKnown RBP13.86□□□□□ -0.19
USB1-203ENST00000539737 CPSF6Q16630 551 aaKnown RBP eCLIP13.86□□□□□ -0.19
USB1-203ENST00000539737 ADNP2Q6IQ32 1131 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 CHSY3Q70JA7 882 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 LGI4Q8N135 537 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms