RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FGF17O60258 216 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 B4GALT2O60909 372 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CSO75390 466 aaKnown RBP15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CIB2O75838 187 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 SORBS2O94875 1100 aaKnown RBP15.2■□□□□ 0.02
TRAF3-204ENST00000539721 NTRK1P04629 796 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CDK4P11802 303 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 ME2P23368 584 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 MPIP34949 423 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 GPC1P35052 558 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 TSPAN7P41732 249 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 ID2Q02363 134 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 NHLH1Q02575 133 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 GAB1Q13480 694 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CEBPEQ15744 281 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAF3-204ENST00000539721 SLCO6A1Q86UG4 719 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 ZNF595Q8IYB9 648 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CLEC4FQ8N1N0 589 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 LRRC25Q8N386 305 aaPredicted RBP15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CCDC124Q96CT7 223 aaKnown RBP15.2■□□□□ 0.02
TRAF3-204ENST00000539721 DEPDC7Q96QD5 511 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 SLC35A5Q9BS91 424 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 CXorf36Q9H7Y0 433 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 SLC39A1Q9NY26 324 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 TRPC4Q9UBN4 977 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 SLC7A8Q9UHI5 535 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 SNX8Q9Y5X2 465 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 KIF26BQ2KJY2 2108 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 NUP210LQ5VU65 1888 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 PRORSD1PA6NEY8 169 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 EVPLLA8MZ36 301 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CLIC1O00299 241 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CLDN4O14493 209 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CDC123O75794 336 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 GPR75O95800 540 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 FHP07954 510 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 TCN1P20061 433 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 PPP2R1BP30154 601 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CDK9P50750 372 aaKnown RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 SLC13A2Q13183 592 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 ERV3-1Q14264 604 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 HES3Q5TGS1 186 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 FAM13CQ8NE31 585 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 OR5AK3PQ8NH89 298 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 SUN3Q8TAQ9 357 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 ZFP90Q8TF47 636 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 ECSITQ9BQ95 431 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 IKZF5Q9H5V7 419 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 PRTFDC1Q9NRG1 225 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 FER1L5A0AVI2 2057 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 PCNX2A6NKB5 2137 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CPMP14384 443 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 PORP16435 677 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 UQCRC2P22695 453 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 PPIBP23284 216 aaKnown RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 PTGER1P34995 402 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CHI3L1P36222 383 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 LIPEQ05469 1076 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 SPDYE7PQ495Y7 208 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 RAB11FIP2Q7L804 512 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 SLC38A9Q8NBW4 561 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 FAM156AQ8NDB6 213 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 ANKRD9Q96BM1 317 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 LIN37Q96GY3 246 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 OR1F2PQ96R84 312 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 TRIM4Q9C037 500 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 ALG2Q9H553 416 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 TPT1P8Q9HAU6 139 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 SIRT3Q9NTG7 399 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 GMPR2Q9P2T1 348 aaKnown RBP15.19■□□□□ 0.02
TRAF3-204ENST00000539721 CD300AQ9UGN4 299 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 ACSL6Q9UKU0 697 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 AP3M1Q9Y2T2 418 aa15.19■□□□□ 0.02
TRAF3-204ENST00000539721 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 SPAARA0A1B0GVQ0 90 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 CTNSO60931 367 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 CPNE3O75131 537 aaKnown RBP15.18■□□□□ 0.02
TRAF3-204ENST00000539721 JRKO75564 520 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 FTH1P19P0C7X4 201 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 ITIH1P19827 911 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 ABHD18Q0P651 414 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 STX4Q12846 297 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 SPATS1Q496A3 300 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 C6orf163Q5TEZ5 329 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 ANGPTL8Q6UXH0 198 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 CEACAM20Q6UY09 585 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 IFNEQ86WN2 208 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 OR9A2Q8NGT5 310 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 PSMA8Q8TAA3 256 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 PNPT1Q8TCS8 783 aaKnown RBP15.18■□□□□ 0.02
TRAF3-204ENST00000539721 PIF1Q9H611 641 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 SEMA3GQ9NS98 782 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 CORO2BQ9UQ03 480 aa15.18■□□□□ 0.02
TRAF3-204ENST00000539721 RNF103-CHMP3A0A140T963 221 aa15.17■□□□□ 0.02
TRAF3-204ENST00000539721 DNAJA2O60884 412 aa15.17■□□□□ 0.02
TRAF3-204ENST00000539721 C1QCP02747 245 aa15.17■□□□□ 0.02
TRAF3-204ENST00000539721 HSD17B1P14061 328 aa15.17■□□□□ 0.02
TRAF3-204ENST00000539721 CSRP1P21291 193 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms