RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 G3V3Y1 287 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 FOXE1O00358 373 aaPredicted RBP20.55■□□□□ 0.88
SCARB1-206ENST00000539320 OR7A17O14581 309 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 ADAM10O14672 748 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 ZNF354AO60765 605 aaPredicted RBP20.55■□□□□ 0.88
SCARB1-206ENST00000539320 SMIM24O75264 130 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 SEMA3DO95025 777 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 CLDN14O95500 239 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 TNFRSF8P28908 595 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 NEK2P51955 445 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 MPEG1Q2M385 716 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 ZNF750Q32MQ0 723 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 ARHGAP11AQ6P4F7 1023 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 C9orf40Q8IXQ3 194 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 ST13P4Q8IZP2 240 aaPredicted RBP20.55■□□□□ 0.88
SCARB1-206ENST00000539320 OR52B6Q8NGF0 335 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 PPWD1Q96BP3 646 aaKnown RBP20.55■□□□□ 0.88
SCARB1-206ENST00000539320 RBM18Q96H35 190 aaKnown RBP20.55■□□□□ 0.88
SCARB1-206ENST00000539320 CDK15Q96Q40 435 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 SERPINI1Q99574 410 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 CNPPD1Q9BV87 410 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 WDR41Q9HAD4 459 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.55■□□□□ 0.889e-14■■□□□ 12.8
SCARB1-206ENST00000539320 ZNF180Q9UJW8 692 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 PCTPQ9UKL6 214 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 ASB4Q9Y574 426 aa20.55■□□□□ 0.88
SCARB1-206ENST00000539320 TRIM49D1C9J1S8 452 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 POC1B-GALNT4F8VUJ3 575 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 PROM1O43490 865 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 OR10H2O60403 315 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 AIFM1O95831 613 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 FAM58BPP0C7Q3 252 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 COX6B1P14854 86 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 CNTFP26441 200 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 PTGER4P35408 488 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 PPIAP62937 165 aaKnown RBP20.54■□□□□ 0.88
SCARB1-206ENST00000539320 ASPHQ12797 758 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 TRAF3Q13114 568 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 CDSNQ15517 529 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 SPRED3Q2MJR0 410 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 GLE1Q53GS7 698 aaKnown RBP20.54■□□□□ 0.88
SCARB1-206ENST00000539320 DGAT2L6Q6ZPD8 337 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 RGS9BPQ6ZS82 235 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 SLC22A16Q86VW1 577 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 SRRM1Q8IYB3 904 aaKnown RBP20.54■□□□□ 0.88
SCARB1-206ENST00000539320 SLC22A8Q8TCC7 542 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 MTFMTQ96DP5 389 aaKnown RBP20.54■□□□□ 0.88
SCARB1-206ENST00000539320 FAM173AQ9BQD7 235 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 TTTY12Q9BZ98 90 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 ZDHHC11Q9H8X9 412 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 SACM1LQ9NTJ5 587 aa20.54■□□□□ 0.88
SCARB1-206ENST00000539320 A0A1W2PR48 441 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 HRKO00198 91 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 GPR75O95800 540 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 SNRPB2P08579 225 aaKnown RBP20.53■□□□□ 0.88
SCARB1-206ENST00000539320 COL6A2P12110 1019 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 HERVK_113P63132 956 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 ERVK-8P63133 956 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 PIGGQ5H8A4 983 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 C10orf62Q5T681 223 aaPredicted RBP20.53■□□□□ 0.88
SCARB1-206ENST00000539320 NDUFAF5Q5TEU4 345 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 FRG2Q64ET8 278 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 PAOXQ6QHF9 649 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 GDF7Q7Z4P5 450 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 UHMK1Q8TAS1 419 aaKnown RBP20.53■□□□□ 0.88
SCARB1-206ENST00000539320 DCAKDQ8WVC6 231 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 NSUN5Q96P11 429 aaKnown RBP20.53■□□□□ 0.88
SCARB1-206ENST00000539320 FRG2BQ96QU4 278 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 NTMT1Q9BV86 223 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 ERVK-6Q9BXR3 956 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 DEFB127Q9H1M4 99 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 ZBTB26Q9HCK0 441 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 ERVK-19Q9WJR5 959 aa20.53■□□□□ 0.88
SCARB1-206ENST00000539320 A0A087WUV0 522 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 GLOD5A6NK44 160 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 PDE9AO76083 593 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 GLSO94925 669 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 P04436 131 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 RPS17P08708 135 aaKnown RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 CCL3P10147 92 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 CNR1P21554 472 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 GGTA1PQ4G0N0 100 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 TTC19Q6DKK2 380 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 OR52E8Q6IFG1 317 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 RNF111Q6ZNA4 994 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 FAM47EQ6ZV65 393 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 DOK4Q8TEW6 326 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 SDCCAG3Q96C92 435 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 GAL3ST4Q96RP7 486 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 MRPL57Q9BQC6 102 aaKnown RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 MRPL46Q9H2W6 279 aaKnown RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 TP63Q9H3D4 680 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-206ENST00000539320 IL1RL2Q9HB29 575 aa20.52■□□□□ 0.88
SCARB1-206ENST00000539320 CSMD1Q96PZ7 3565 aa20.51■□□□□ 0.87
SCARB1-206ENST00000539320 IQANK1A0A1B0GTG1 560 aa20.51■□□□□ 0.87
SCARB1-206ENST00000539320 ENO4A6NNW6 628 aa20.51■□□□□ 0.87
SCARB1-206ENST00000539320 NADKO95544 446 aaPredicted RBP20.51■□□□□ 0.87
SCARB1-206ENST00000539320 GBAP04062 536 aa20.51■□□□□ 0.87
SCARB1-206ENST00000539320 DNASE1L1P49184 302 aa20.51■□□□□ 0.87
SCARB1-206ENST00000539320 IFT88Q13099 833 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms