RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NDRG2Q9UN36 371 aaKnown RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SIT1Q9Y3P8 196 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 KIAA1549LQ6ZVL6 1849 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 DSCR3O14972 297 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 POP7O75817 140 aaKnown RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 GASTP01350 101 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 DBTP11182 482 aaKnown RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 PIPP12273 146 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 DDX5P17844 614 aaKnown RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 S100A5P33763 92 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 GRK5P34947 590 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 DGKGP49619 791 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 MEF2AQ02078 507 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 CYP27C1Q4G0S4 372 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 COLEC12Q5KU26 742 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 PRAMEF14Q5SWL7 426 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 PRAMEF13Q5VWM6 474 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SAXO2Q658L1 398 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 FRMPD2BQ6IN97 320 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 C19orf48Q6RUI8 117 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 VN1R5Q7Z5H4 357 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 FAM129CQ86XR2 697 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 AQP11Q8NBQ7 271 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 OR5P2Q8WZ92 322 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 RAD51AP1Q96B01 352 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 NEURL3Q96EH8 262 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SHDQ96IW2 340 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 ZDHHC5Q9C0B5 715 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 CXorf36Q9H7Y0 433 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SCHIP1Q9P0W5 487 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 CFAP20Q9Y6A4 193 aaKnown RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 DSPPQ9NZW4 1301 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 FAM170BA6NMN3 283 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 K7ESM1 405 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 VEGFDO43915 354 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 SEMA3DO95025 777 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 RECKO95980 971 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 DDCP20711 480 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 CHMP24386 653 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 ITGB7P26010 798 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 SERPINB1P30740 379 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 EIF2B2P49770 351 aaKnown RBP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 TCF15Q12870 199 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 GANABQ14697 944 aaKnown RBP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 DHCR24Q15392 516 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 DUSP7Q16829 419 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 TIMM50Q3ZCQ8 353 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 RAET1GQ6H3X3 334 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 KLHL17Q6TDP4 642 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF547Q8IVP9 402 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 TAGAPQ8N103 731 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF366Q8N895 744 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF740Q8NDX6 193 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 FAM46DQ8NEK8 389 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 APOBEC4Q8WW27 367 aaKnown RBP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 GTPBP3Q969Y2 492 aaKnown RBP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 C6orf62Q9GZU0 229 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 OR51E2Q9H255 320 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 RHBGQ9H310 441 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 NMNAT1Q9HAN9 279 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-207ENST00000538862 A4GALTQ9NPC4 353 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 ANKMY1Q9P2S6 941 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 PEX16Q9Y5Y5 336 aa13.81□□□□□ -0.2
CDCA3-207ENST00000538862 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-207ENST00000538862 CACNB4O00305 520 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-207ENST00000538862 KDM1AO60341 852 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 ADAP00813 363 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 POU2F1P14859 743 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 KELP23276 732 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 SLC15A1P46059 708 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 UGT2B15P54855 530 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 PUM1Q14671 1186 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDCA3-207ENST00000538862 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 LMNTD1Q8N9Z9 388 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-207ENST00000538862 OR52A5Q9H2C5 316 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 ABCB10Q9NRK6 738 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF229Q9UJW7 825 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 LOC100506127A0A0U1RQW1 187 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 C5orf58C9J3I9 102 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 ZW10O43264 779 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 PDE9AO76083 593 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 OXSR1O95747 527 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-207ENST00000538862 C6P13671 934 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 CXCR2P25025 360 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 CNR2P34972 360 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 SOX6P35712 828 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 ETV6P41212 452 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 RPA4Q13156 261 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 NFE2L1Q14494 772 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 MAPK11Q15759 364 aa13.8□□□□□ -0.2
CDCA3-207ENST00000538862 DEPDC1Q5TB30 811 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms