RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 EMP2P54851 167 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 PCBP4P57723 403 aaKnown RBP22.04■■□□□ 1.12
TMEM260-202ENST00000538838 KCNK10P57789 538 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 IGLV3-21P80748 117 aaPredicted RBP22.04■■□□□ 1.12
TMEM260-202ENST00000538838 SRSF11Q05519 484 aaKnown RBP22.04■■□□□ 1.12
TMEM260-202ENST00000538838 LANCL3Q6ZV70 420 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 FITM2Q8N6M3 262 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 OR8J2Q8NGG1 315 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 VPS33AQ96AX1 596 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 MESP1Q9BRJ9 268 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 BHLHE41Q9C0J9 482 aaPredicted RBP22.04■■□□□ 1.12
TMEM260-202ENST00000538838 GIMAP4Q9NUV9 329 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 ANGPTL2Q9UKU9 493 aa22.04■■□□□ 1.12
TMEM260-202ENST00000538838 MRPS18BQ9Y676 258 aaKnown RBP22.04■■□□□ 1.12
TMEM260-202ENST00000538838 SLC22A2O15244 555 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 TLX3O43711 291 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-202ENST00000538838 PGRP06401 933 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 CD63P08962 238 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 CAPN3P20807 821 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 ADSLP30566 484 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-202ENST00000538838 PTGER1P34995 402 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 WNT3P56703 355 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 NSDHLQ15738 373 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 VASH2Q86V25 355 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 PLPP5Q8NEB5 264 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 SPDL1Q96EA4 605 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 BBS4Q96RK4 519 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 GPR87Q9BY21 358 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 ALOXE3Q9BYJ1 711 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 GPN2Q9H9Y4 310 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-202ENST00000538838 TMEM45AQ9NWC5 275 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 IL17BQ9UHF5 180 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 FRYQ5TBA9 3013 aa22.03■■□□□ 1.12
TMEM260-202ENST00000538838 MED19A0JLT2 244 aaPredicted RBP22.02■■□□□ 1.12
TMEM260-202ENST00000538838 ALOX12BO75342 701 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 IL6P05231 212 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 CPMP14384 443 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 DDX5P17844 614 aaKnown RBP22.02■■□□□ 1.12
TMEM260-202ENST00000538838 NTSP30990 170 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 CLN3Q13286 438 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 KIAA1143Q96AT1 154 aaPredicted RBP22.02■■□□□ 1.12
TMEM260-202ENST00000538838 NAF1Q96HR8 494 aaKnown RBP22.02■■□□□ 1.12
TMEM260-202ENST00000538838 SLC52A3Q9NQ40 469 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 NCOR2Q9Y618 2525 aa22.02■■□□□ 1.12
TMEM260-202ENST00000538838 TCRBV16S1A1N1A0A5B0 115 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 ASPDHA6ND91 283 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 CCDC154A6NI56 674 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 CAPN14A8MX76 684 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 MYO1GB0I1T2 1018 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 LIFP15018 202 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 PORP16435 677 aaPredicted RBP22.02■■□□□ 1.11
TMEM260-202ENST00000538838 CEBPEQ15744 281 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 VPS26BQ4G0F5 336 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 ANKRD46Q86W74 232 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 SNX32Q86XE0 403 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 CCDC116Q8IYX3 515 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 LRRC25Q8N386 305 aaPredicted RBP22.02■■□□□ 1.11
TMEM260-202ENST00000538838 POU5F2Q8N7G0 328 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 SUN3Q8TAQ9 357 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 GATA6Q92908 595 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 FGF11Q92914 225 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 OR52E6Q96RD3 313 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 KCND3Q9UK17 655 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 PCDHGA6Q9Y5G7 932 aa22.02■■□□□ 1.11
TMEM260-202ENST00000538838 CSNK2A2P19784 350 aaPredicted RBP22.01■■□□□ 1.11
TMEM260-202ENST00000538838 FRKP42685 505 aaPredicted RBP22.01■■□□□ 1.11
TMEM260-202ENST00000538838 NCBP2P52298 156 aaKnown RBP eCLIP22.01■■□□□ 1.11
TMEM260-202ENST00000538838 SRSF6Q13247 344 aaKnown RBP22.01■■□□□ 1.11
TMEM260-202ENST00000538838 SERTAD2Q14140 314 aa22.01■■□□□ 1.11
TMEM260-202ENST00000538838 LTB4RQ15722 352 aa22.01■■□□□ 1.11
TMEM260-202ENST00000538838 CLECL1Q8IZS7 167 aa22.01■■□□□ 1.11
TMEM260-202ENST00000538838 METTL21AQ8WXB1 218 aa22.01■■□□□ 1.11
TMEM260-202ENST00000538838 PPWD1Q96BP3 646 aaKnown RBP22.01■■□□□ 1.11
TMEM260-202ENST00000538838 GLIPR2Q9H4G4 154 aa22.01■■□□□ 1.11
TMEM260-202ENST00000538838 SEMA3GQ9NS98 782 aa22.01■■□□□ 1.11
TMEM260-202ENST00000538838 FAM120CQ9NX05 1096 aaKnown RBP22.01■■□□□ 1.11
TMEM260-202ENST00000538838 SCN2BO60939 215 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 CYC1P08574 325 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 SNRPB2P08579 225 aaKnown RBP22■■□□□ 1.11
TMEM260-202ENST00000538838 PLIN5Q00G26 463 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 DGAT2L6Q6ZPD8 337 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 ZNF551Q7Z340 670 aaPredicted RBP22■■□□□ 1.11
TMEM260-202ENST00000538838 ANKRD37Q7Z713 158 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 SAMD14Q8IZD0 417 aaPredicted RBP22■■□□□ 1.11
TMEM260-202ENST00000538838 ST13P4Q8IZP2 240 aaPredicted RBP22■■□□□ 1.11
TMEM260-202ENST00000538838 C8orf44Q96CB5 159 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 AMDHD1Q96NU7 426 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 DGAT2Q96PD7 388 aa22■■□□□ 1.11
TMEM260-202ENST00000538838 PNO1Q9NRX1 252 aaKnown RBP22■■□□□ 1.11
TMEM260-202ENST00000538838 LOC100653049A0A140TA62 436 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 A0A1W2PRB8 838 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 CFLARO15519 480 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 OR10H2O60403 315 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 KRT34O76011 436 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 IFNA16P05015 189 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 SLC35E2P0CK97 266 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 STT3AP46977 705 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 HSPB3Q12988 150 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 IL10RAQ13651 578 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 MAPRE2Q15555 327 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms