RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 JRKLQ9Y4A0 524 aa4.82□□□□□ -1.64
GCSHP4-201ENST00000538792 FLNBO75369 2602 aaKnown RBP4.82□□□□□ -1.64
GCSHP4-201ENST00000538792 MYO18BQ8IUG5 2567 aa4.82□□□□□ -1.64
GCSHP4-201ENST00000538792 ANKRD12Q6UB98 2062 aa4.82□□□□□ -1.64
GCSHP4-201ENST00000538792 HEATR5BQ9P2D3 2071 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ZCWPW2A0A1B0GU75 182 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 C17orf113A0A1B0GUU1 675 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 HEATR9A2RTY3 570 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 OR6C74A6NCV1 312 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 OR5K3A6NET4 321 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 A6NNC1 897 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 H3BMH7 237 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 TMX2-CTNND1H3BSU7 103 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 GOLGA8MH3BSY2 632 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PIP5K1BO14986 540 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 RRP8O43159 456 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 KCNJ13O60928 360 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 GPC4O75487 556 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 KRT14P02533 472 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ANKRD34CP0C6C1 535 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 LIPCP11150 499 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SLC2A4P14672 509 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PVRP15151 417 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 AMD1P17707 334 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 NELFEP18615 380 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 POLR2CP19387 275 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CCKARP32238 428 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CSTF2P33240 577 aaKnown RBP eCLIP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 TNNT3P45378 269 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 THBS3P49746 956 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PGGT1BP53609 377 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CSE1LP55060 971 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 MRPS25P82663 173 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PDE1BQ01064 536 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 BIRC2Q13490 618 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CBFBQ13951 182 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ITIH4Q14624 930 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ZIC1Q15915 447 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PRTGQ2VWP7 1150 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CCSMST1Q4G0I0 132 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 GLE1Q53GS7 698 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ATP1A1-AS1Q5TC04 95 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 LCN10Q6JVE6 187 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 IRGCQ6NXR0 463 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ZNF549Q6P9A3 640 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CCDC137Q6PK04 289 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 AFTPHQ6ULP2 937 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PPP1R21Q6ZMI0 780 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CENPUQ71F23 418 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PRSS42Q7Z5A4 293 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 TRIM73Q86UV7 250 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CCDC89Q8N998 374 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 NAT8LQ8N9F0 302 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 OR4E2Q8NGC2 313 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 OR52E1Q8NGJ3 308 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ACTRT1Q8TDG2 376 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 UBE2Q2Q8WVN8 375 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 TFGQ92734 400 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 MAGOHBQ96A72 148 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 TMEM159Q96B96 161 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SH3KBP1Q96B97 665 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ELMO2Q96JJ3 720 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SLC41A2Q96JW4 573 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ZNF514Q96K75 400 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 BIRC8Q96P09 236 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SERPINB12Q96P63 405 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PPP1R2P1Q96PQ5 205 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CCNL2Q96S94 520 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 FERMT1Q9BQL6 677 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ABHD14AQ9BUJ0 271 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 DDA1Q9BW61 102 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 RAB33BQ9H082 229 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 DDX47Q9H0S4 455 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 FBXO8Q9NRD0 319 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 HRASLS2Q9NWW9 162 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SLC39A1Q9NY26 324 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SPHK1Q9NYA1 384 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 CIDEBQ9UHD4 219 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ZNF580Q9UK33 172 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ACSL5Q9ULC5 683 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 SLC39A10Q9ULF5 831 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PLAGL1Q9UM63 463 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 ICKQ9UPZ9 632 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 RUVBL2Q9Y230 463 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 TMEM184BQ9Y519 407 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 MRPS18BQ9Y676 258 aaKnown RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 NFS1Q9Y697 457 aa4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 UBR5O95071 2799 aaPredicted RBP4.81□□□□□ -1.64
GCSHP4-201ENST00000538792 PCM1Q15154 2024 aa4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 NBPF19A0A087WUL8 3843 aa4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 UTP20O75691 2785 aaKnown RBP4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 E7EVH7 732 aa4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 PGRMC1O00264 195 aaKnown RBP4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 NKX2-8O15522 239 aa4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 PRPF4O43172 522 aaKnown RBP eCLIP4.8□□□□□ -1.64
GCSHP4-201ENST00000538792 RAD1O60671 282 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms