RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TESQ9UGI8 421 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ANGPT4Q9Y264 503 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 NCKAP1Q9Y2A7 1128 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF106Q9H2Y7 1883 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 CASKO14936 926 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 CLDN7O95471 211 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ZDHHC11BP0C7U3 371 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 SPAM1P38567 509 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 XKR6Q5GH73 641 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 C3orf38Q5JPI3 329 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ATXN7L2Q5T6C5 722 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF57Q68EA5 555 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 LRRC17Q8N6Y2 441 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 LHFPL5Q8TAF8 219 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 MSANTD3Q96H12 275 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 TM9SF2Q99805 663 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 P2RY13Q9BPV8 354 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 MED28Q9H204 178 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 RC3H2Q9HBD1 1191 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 PTTG3PQ9NZH4 202 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 SMAD6O43541 496 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 GABRA5P31644 462 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 SOX9P48436 509 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 AGFG1P52594 562 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ATN1P54259 1190 aaPredicted RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 PFN3P60673 137 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 FCN2Q15485 313 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 COL28A1Q2UY09 1125 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF385BQ569K4 471 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 FAM122CQ6P4D5 195 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 DENND1CQ8IV53 801 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 FAM26EQ8N5C1 309 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 OR4K1Q8NGD4 311 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 UCN3Q969E3 161 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ATF6BQ99941 703 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 HEXA-AS1Q9H8Q6 139 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 BRF2Q9HAW0 419 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ZFP64Q9NPA5 681 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ISYNA1Q9NPH2 558 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ASB4Q9Y574 426 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ETHE1O95571 254 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ENPP1P22413 925 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC6A1P30531 599 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 LIM2P55344 173 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 AP1S2P56377 157 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CYP4F8P98187 520 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 SP140Q13342 867 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CXorf57Q6NSI4 855 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CDH24Q86UP0 819 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 UFD1Q92890 307 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 WACQ9BTA9 647 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 POLR2J3Q9H1A7 115 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 LIN7BQ9HAP6 207 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 COQ3Q9NZJ6 369 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 PADI3Q9ULW8 664 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CCDC88CQ9P219 2028 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 A0A0A6YYJ9 748 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 GNG14A0A1W2PPG7 69 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 TMEM129A0AVI4 362 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 OR10H3O60404 316 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 C6orf47O95873 294 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ARAFP10398 606 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CD52P31358 61 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 FABP5Q01469 135 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CAP1Q01518 475 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 MRPL58Q14197 206 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF267Q14586 743 aaPredicted RBP17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 PUM1Q14671 1186 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■■□□□ 11.6
SFSWAP-207ENST00000538548 SEC23BQ15437 767 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF284Q2VY69 593 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 KLHL12Q53G59 568 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC25A30Q5SVS4 291 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CD200R1LQ6Q8B3 271 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 COMMD7Q86VX2 200 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 GPALPP1Q8IXQ4 340 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 EMC7Q9NPA0 242 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 PCDH10Q9P2E7 1040 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ATP6V1HQ9UI12 483 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 ACSL6Q9UKU0 697 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 MAP4K5Q9Y4K4 846 aa17.68■□□□□ 0.42
SFSWAP-207ENST00000538548 CIB4A0PJX0 185 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 AGAP14A8MT82 685 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 TLX2O43763 284 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 PSIP1O75475 530 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 WEE1P30291 646 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 BDKRB1P46663 353 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ATP12AP54707 1039 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 AP1S1P61966 158 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 KCNC3Q14003 757 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 SPIN4Q56A73 249 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 SYT14P1Q58G82 188 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 DCST1Q5T197 706 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 GPR139Q6DWJ6 353 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF366Q8N895 744 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 GALNT11Q8NCW6 608 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 WRAP53Q9BUR4 548 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 POLDIP3Q9BY77 421 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms