RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 IFT52Q9Y366 437 aa9.62□□□□□ -0.87
GGA3-201ENST00000537686 PCDHB14Q9Y5E9 798 aa9.62□□□□□ -0.87
GGA3-201ENST00000537686 SPTBN2O15020 2390 aa9.62□□□□□ -0.87
GGA3-201ENST00000537686 A0A1W2PQ72 361 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ANHXE9PGG2 379 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SCAMP2O15127 329 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 TRIM3O75382 744 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 ITGA10O75578 1167 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CDRT1O95170 752 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 HNRNPA2B1P22626 353 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 S100GP29377 79 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 RASGEF1BQ0VAM2 473 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ODF4Q2M2E3 257 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 NDUFAF5Q5TEU4 345 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 GRHL2Q6ISB3 625 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 RTN4RL1Q86UN2 441 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 C16orf78Q8WTQ4 265 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 NEIL2Q969S2 332 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 NT5C3BQ969T7 300 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TAMM41Q96BW9 452 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TMEM19Q96HH6 336 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 PIP5K1AQ99755 562 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 MARCH5Q9NX47 278 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 VAPAQ9P0L0 249 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 GPR34Q9UPC5 381 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 FKBP7Q9Y680 259 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 H0YAE9 185 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ORC5O43913 435 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SDC3O75056 442 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SORBS2O94875 1100 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 PENKP01210 267 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 GABRB3P28472 473 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 GCGRP47871 477 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 STARP49675 285 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TPTEP56180 551 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CLDN2P57739 230 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 RPS15AP62244 130 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 NPRL3Q12980 569 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CGB2Q6NT52 195 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ASB18Q6ZVZ8 466 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 GAREM2Q75VX8 874 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TRIM73Q86UV7 250 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 DTWD1Q8N5C7 304 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 YIPF7Q8N8F6 280 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ANKLE1Q8NAG6 615 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 DTD2Q96FN9 168 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 EGLN2Q96KS0 407 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 C3orf30Q96M34 536 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SMOXQ9NWM0 555 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 GPRC5BQ9NZH0 403 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 A0A1B0GVT2 93 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 NUAK1O60285 661 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 RAB36O95755 333 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 PLGP00747 810 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 CYP17A1P05093 508 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TIMP2P16035 220 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SDC1P18827 310 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TNFRSF1BP20333 461 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ERVFC1P60507 584 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 HNRNPKP61978 463 aaKnown RBP eCLIP9.61□□□□□ -0.87
GGA3-201ENST00000537686 SHC2P98077 582 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 RPA4Q13156 261 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ZNF404Q494X3 552 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TNFAIP8L3Q5GJ75 292 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CDKL4Q5MAI5 379 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TTLL10Q6ZVT0 673 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CNTN4Q8IWV2 1026 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 OR52P1PQ8NH57 321 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 FAM3CQ92520 227 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 MND1Q9BWT6 205 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ASPNQ9BXN1 380 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CPEB1Q9BZB8 566 aaKnown RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 BHLHE41Q9C0J9 482 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 C8orf33Q9H7E9 229 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 NPC1O15118 1278 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SCO2O43819 266 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 RASAL1O95294 804 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CYB5AP00167 134 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CD72P21854 359 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 HOXC12P31275 282 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 CASRP41180 1078 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 VBP1P61758 197 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ARFRP1Q13795 201 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 TYSND1Q2T9J0 566 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 OR4C11Q6IEV9 310 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ZNF852Q6ZMS4 543 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 ZNF550Q7Z398 422 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 GOLM1Q8NBJ4 401 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 SUN3Q8TAQ9 357 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 INPP5KQ9BT40 448 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 LGR4Q9BXB1 951 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 KCNK13Q9HB14 408 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 PAK6Q9NQU5 681 aaPredicted RBP9.61□□□□□ -0.87
GGA3-201ENST00000537686 SAGE1Q9NXZ1 904 aa9.61□□□□□ -0.87
GGA3-201ENST00000537686 LHX3Q9UBR4 397 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms