RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 ATG4BQ9Y4P1 393 aa8.95□□□□□ -0.98
CHD4-207ENST00000537634 PCDHGA11Q9Y5H2 935 aa8.95□□□□□ -0.98
CHD4-207ENST00000537634 PDZD2O15018 2839 aa8.95□□□□□ -0.98
CHD4-207ENST00000537634 OTOGQ6ZRI0 2925 aa8.95□□□□□ -0.98
CHD4-207ENST00000537634 CCDC168Q8NDH2 2452 aa8.95□□□□□ -0.98
CHD4-207ENST00000537634 POLQO75417 2590 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 CSMD1Q96PZ7 3565 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 IQANK1A0A1B0GTG1 560 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 A0A1B0GVC2 190 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 CCDC189A1A4V9 331 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 AQP7O14520 342 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SUSD5O60279 629 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 OR10H2O60403 315 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 TOXO94900 526 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 IGKV3-11P04433 115 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 CELA3AP09093 270 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 NR2F6P10588 404 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 MTHFD2P13995 350 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 ALOX15P16050 662 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 PTX3P26022 381 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 PIGAP37287 484 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 ARL1P40616 181 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 PIK3CGP48736 1102 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 ARFIP1P53367 373 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 ALDH18A1P54886 795 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 HNRNPH2P55795 449 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 HERVK_113P63132 956 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 ERVK-8P63133 956 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 KCNJ2P63252 427 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 IRF9Q00978 393 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 TFF3Q07654 80 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 FOXO1Q12778 655 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SLC10A1Q14973 349 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SETDB1Q15047 1291 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 PFKFB4Q16877 469 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 HYAL4Q2M3T9 481 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 WLSQ5T9L3 541 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 LIPJQ5W064 366 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SLC22A10Q63ZE4 541 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 C18orf63Q68DL7 685 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 KLC3Q6P597 504 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 CYP20A1Q6UW02 462 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 RNF111Q6ZNA4 994 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SLC29A4Q7RTT9 530 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 DND1Q8IYX4 353 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 ST13P4Q8IZP2 240 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 CENPLQ8N0S6 344 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 RNF175Q8N4F7 328 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SLC15A4Q8N697 577 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 RHEBL1Q8TAI7 183 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 PPWD1Q96BP3 646 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 SARAFQ96BY9 339 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SPACA9Q96E40 222 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 ERVK-6Q9BXR3 956 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 WDR41Q9HAD4 459 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 LYARQ9NX58 379 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 TNFRSF10DQ9UBN6 386 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 ACAD8Q9UKU7 415 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 BOKQ9UMX3 212 aaPredicted RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 ERVK-19Q9WJR5 959 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 TSC22D4Q9Y3Q8 395 aa8.94□□□□□ -0.98
CHD4-207ENST00000537634 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 ANKRD17O75179 2603 aaKnown RBP8.94□□□□□ -0.98
CHD4-207ENST00000537634 TRGV5A0A0B4J1U4 118 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 H0YIV9 168 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 HRKO00198 91 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 UGDHO60701 494 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 HCN1O60741 890 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 WDR1O75083 606 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 PRKRAO75569 313 aaKnown RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 NADKO95544 446 aaPredicted RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 GPR75O95800 540 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 C2P06681 752 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 SERPINB3P29508 390 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 CASQ1P31415 396 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 ZFP36L2P47974 494 aaKnown RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 SERPINB8P50452 374 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 RIPPLY3P57055 190 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 RPS13P62277 151 aaKnown RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 GTF2H2Q13888 395 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 ZNF267Q14586 743 aaPredicted RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 ACAP2Q15057 778 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 UAP1Q16222 522 aaPredicted RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 CPSF6Q16630 551 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD4-207ENST00000537634 SPRED3Q2MJR0 410 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 ZNF791Q3KP31 576 aaPredicted RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 MROH9Q5TGP6 573 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 PRAMEF20Q5VT98 475 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 GTF2H2CQ6P1K8 395 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 ZDHHC24Q6UX98 284 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 DGAT2L6Q6ZPD8 337 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 TMEM200AQ86VY9 491 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 NUDT13Q86X67 352 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 DMRTC2Q8IXT2 367 aaPredicted RBP8.93□□□□□ -0.98
CHD4-207ENST00000537634 CLYBLQ8N0X4 340 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 FBXW8Q8N3Y1 598 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 PAQR8Q8TEZ7 354 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 RIT1Q92963 219 aa8.93□□□□□ -0.98
CHD4-207ENST00000537634 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms