RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TBC1D15Q8TC07 691 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 CYB5D2Q8WUJ1 264 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 ATG5Q9H1Y0 275 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 NPIPA2E9PIF3 369 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 NPIPA3F8WFD2 350 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 ATG12O94817 140 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 DLDP09622 509 aaKnown RBP10.22□□□□□ -0.77
CLIP1-209ENST00000537178 HK3P52790 923 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 DNAJB13P59910 316 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 GALNT2Q10471 571 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 KCNAB2Q13303 367 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 PIGGQ5H8A4 983 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 TXNDC8Q6A555 127 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 CILP2Q8IUL8 1156 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 RBM12BQ8IXT5 1001 aaKnown RBP10.22□□□□□ -0.77
CLIP1-209ENST00000537178 OR8J3Q8NGG0 315 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.22□□□□□ -0.777e-8■■■■□ 19.9
CLIP1-209ENST00000537178 TMEM175Q9BSA9 504 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 ARL6Q9H0F7 186 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 INSL6Q9Y581 213 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 HS3ST4Q9Y661 456 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 ATRNL1Q5VV63 1379 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 FBP2O00757 339 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 HCRTR2O43614 444 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 LATS1O95835 1130 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 CSTAP01040 98 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 HOXB2P14652 356 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 AMY2BP19961 511 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 THBS2P35442 1172 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 SNTB2Q13425 540 aaKnown RBP10.22□□□□□ -0.77
CLIP1-209ENST00000537178 BCL2A1Q16548 175 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 OR10Q1Q8NGQ4 319 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 TM9SF4Q92544 642 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 SLC45A3Q96JT2 553 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 FAM83CQ9BQN1 747 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 MTG2Q9H4K7 406 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 CACNG4Q9UBN1 327 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 SCML2Q9UQR0 700 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 TEX264Q9Y6I9 313 aa10.22□□□□□ -0.77
CLIP1-209ENST00000537178 EEF1E1O43324 174 aaKnown RBP10.21□□□□□ -0.77
CLIP1-209ENST00000537178 STATHP02808 62 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 GALTP07902 379 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 EDNRBP24530 442 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 ECH1Q13011 328 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 SGCAQ16586 387 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 WDR45BQ5MNZ6 344 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 CMTM8Q8IZV2 173 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 OR7G2Q8NG99 324 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 ZFAND2BQ8WV99 257 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 HS6ST2Q96MM7 605 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF382Q96SR6 550 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 SECISBP2Q96T21 854 aaKnown RBP10.21□□□□□ -0.77
CLIP1-209ENST00000537178 C17orf62Q9BQA9 187 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 PELOQ9BRX2 385 aaKnown RBP10.21□□□□□ -0.77
CLIP1-209ENST00000537178 MRM3Q9HC36 420 aaKnown RBP10.21□□□□□ -0.77
CLIP1-209ENST00000537178 PRTFDC1Q9NRG1 225 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 RHCGQ9UBD6 479 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 KDELR3O43731 214 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 FAM189A1O60320 539 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 C7P10643 843 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 PREPP48147 710 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 PRKXP51817 358 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 POLR2HP52434 150 aaKnown RBP10.21□□□□□ -0.77
CLIP1-209ENST00000537178 POU4F2Q12837 409 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF181Q2M3W8 571 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 CEACAM19Q7Z692 300 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 TMPRSS12Q86WS5 348 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 LMX1AQ8TE12 382 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 FZD3Q9NPG1 666 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 ICKQ9UPZ9 632 aa10.21□□□□□ -0.77
CLIP1-209ENST00000537178 TVP23AA6NH52 213 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF705EA8MWA4 302 aaPredicted RBP10.21□□□□□ -0.78
CLIP1-209ENST00000537178 CREBL2O60519 120 aaPredicted RBP10.21□□□□□ -0.78
CLIP1-209ENST00000537178 OR2B3O76000 313 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 GBAP04062 536 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 HEXBP07686 556 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 IFNGR1P15260 489 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF182P17025 639 aaPredicted RBP10.21□□□□□ -0.78
CLIP1-209ENST00000537178 GPR143P51810 404 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 CREB5Q02930 508 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 NIPAL4Q0D2K0 466 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 BORAQ6PGQ7 559 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 TSPAN33Q86UF1 283 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ELMOD2Q8IZ81 293 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 BEST3Q8N1M1 668 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 Q8N402 240 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 OR4K1Q8NGD4 311 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 CLEC4DQ8WXI8 215 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 MSANTD3Q96H12 275 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ABCG5Q9H222 651 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 NANSQ9NR45 359 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 A6NLC8 198 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 APOC3P02656 99 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 INHAP05111 366 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 H2AFB2P0C5Z0 115 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 PYCR1P32322 319 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 HOXD13P35453 343 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms