RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 POT1Q9NUX5 634 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 MS4A12Q9NXJ0 267 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 TMCC3Q9ULS5 477 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 A6NCN8 305 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 HMGN4O00479 90 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ASNA1O43681 348 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 MFN2O95140 757 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TNFP01375 233 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 BCHEP06276 602 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 FHP07954 510 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 PEBP1P30086 187 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 GGT2P36268 569 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 BUD31P41223 144 aaPredicted RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 LIMS1P48059 325 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMG6-203ENST00000536871 CDH12P55289 794 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 RPP38P78345 283 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 SLC35A2P78381 396 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TP53BP2Q13625 1128 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 MANEAQ5SRI9 462 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 GPR107Q5VW38 600 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 SLC48A1Q6P1K1 146 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ZNF793Q6ZN11 406 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 NCCRP1Q6ZVX7 275 aaPredicted RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 TSEN54Q7Z6J9 526 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 ASPGQ86U10 573 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TDHQ8IZJ6 230 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TAGAPQ8N103 731 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 MMP21Q8N119 569 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 LGI4Q8N135 537 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ZNF655Q8N720 491 aaPredicted RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 OR4E2Q8NGC2 313 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 RPLP0P6Q8NHW5 317 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 FNDC8Q8TC99 324 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 FCGR1BQ92637 280 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 FEVQ99581 238 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 BARD1Q99728 777 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 GSDMCQ9BYG8 508 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 RHBDL2Q9NX52 303 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 SCHIP1Q9P0W5 487 aaPredicted RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 ZNF780BQ9Y6R6 833 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TICRRQ7Z2Z1 1910 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 KIR2DS5A0A0G2JLQ3 304 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 A0A0G2JNG1 304 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TCRBV21S2A2A0A5A6 115 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 OR2A25A4D2G3 310 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 C10orf142B7Z368 130 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 KIR2DS3K7RE56 304 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 CASC3O15234 703 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 SEMA4FO95754 770 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 AGR2O95994 175 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ASGR2P07307 311 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 CCNA2P20248 432 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 POU3F3P20264 500 aaPredicted RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 MATN1P21941 496 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 KCNJ5P48544 419 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 CLDN2P57739 230 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 KIR2DS5Q14953 304 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 SUZ12Q15022 739 aaKnown RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 GTF2IRD2BQ6EKJ0 949 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TNFAIP8L2Q6P589 184 aaPredicted RBP12.85□□□□□ -0.35
SMG6-203ENST00000536871 PRSS48Q7RTY5 328 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ABI3BPQ7Z7G0 1075 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 GTF2IRD2Q86UP8 949 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 TRIM48Q8IWZ4 208 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 GJD3Q8N144 294 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 SLC44A3Q8N4M1 653 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 RSC1A1Q92681 617 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 RORBQ92753 470 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ZNF576Q9H609 170 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 SPHK1Q9NYA1 384 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 SEC14L3Q9UDX4 400 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
SMG6-203ENST00000536871 NUMA1Q14980 2115 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 PRAMEF33A0A0G2JMD5 474 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 ZNF99A8MXY4 864 aaPredicted RBP12.84□□□□□ -0.35
SMG6-203ENST00000536871 HNRNPCL2B2RXH8 293 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 H3BMQ9 156 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 EMC8O43402 210 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 RGS10O43665 173 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 SLC28A2O43868 658 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 PRAMEF10O60809 474 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 RASGRP1O95267 797 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 ADAP00813 363 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms