RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ACAD8Q9UKU7 415 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ANGPTL3Q9Y5C1 460 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SYCE1LA8MT33 242 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 HOXD4P09016 255 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CELA3AP09093 270 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PIGAP37287 484 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PLTPP55058 493 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TNFRSF17Q02223 184 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CAV1Q03135 178 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TBL3Q12788 808 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ZNF791Q3KP31 576 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SPNS3Q6ZMD2 512 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DGAT2L6Q6ZPD8 337 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CCDC25Q86WR0 208 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MYLK4Q86YV6 388 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ZCCHC7Q8N3Z6 543 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RNF175Q8N4F7 328 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLC15A4Q8N697 577 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FBF1Q8TES7 1133 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SARAFQ96BY9 339 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 NXNL1Q96CM4 212 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FBXL20Q96IG2 436 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ZNF559Q9BR84 538 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 EXO5Q9H790 373 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SEMA4BQ9NPR2 832 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DMRT3Q9NQL9 472 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TNFRSF10DQ9UBN6 386 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ACOT9Q9Y305 439 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 UTP11Q9Y3A2 253 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TSC22D4Q9Y3Q8 395 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FAM215AQ9Y5M1 114 aa18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PLPP1O14494 284 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 HCN1O60741 890 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 WDR1O75083 606 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 GLI4P10075 376 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MTHFD2P13995 350 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ALOX15P16050 662 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 BUD31P41223 144 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MAGEA4P43358 317 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ZFP36L2P47974 494 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ARFIP1P53367 373 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ETF1P62495 437 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PHEXP78562 749 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 C2orf54Q08AI8 447 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 NAB1Q13506 487 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 WLSQ5T9L3 541 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 LIPJQ5W064 366 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 C18orf63Q68DL7 685 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RTL6Q6ICC9 239 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DND1Q8IYX4 353 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ST13P4Q8IZP2 240 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CLYBLQ8N0X4 340 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RHEBL1Q8TAI7 183 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PAQR8Q8TEZ7 354 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SPACA9Q96E40 222 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MTERF1Q99551 399 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PELOQ9BRX2 385 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CNPPD1Q9BV87 410 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLC24A3Q9HC58 644 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SH2D2AQ9NP31 389 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 KCNN3Q9UGI6 736 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PCDHGA11Q9Y5H2 935 aa18.15■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TRGV5A0A0B4J1U4 118 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 IQANK1A0A1B0GTG1 560 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 HRKO00198 91 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 KLK8O60259 260 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NADKO95544 446 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PTX3P26022 381 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 HNRNPH2P55795 449 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 KCNJ2P63252 427 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CES4AQ5XG92 561 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ADGRD1Q6QNK2 874 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LYPD8Q6UX82 237 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SLC29A4Q7RTT9 530 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CCDC91Q7Z6B0 441 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FBXO25Q8TCJ0 367 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 KCTD4Q8WVF5 259 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 REPS1Q96D71 796 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GAL3ST4Q96RP7 486 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RAB17Q9H0T7 212 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ACTR8Q9H981 624 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RYDENQ9NUL5 291 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 BOKQ9UMX3 212 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FREM3P0C091 2139 aa18.14■□□□□ 0.49
TNFRSF1B-204ENST00000536782 A0A087X1B8 175 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 A0A0G2JNJ9 132 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PROM1O43490 865 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 OR10H2O60403 315 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PRKRAO75569 313 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GPR75O95800 540 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GFAPP14136 432 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SERPINB3P29508 390 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CASQ1P31415 396 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RPS13P62277 151 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 HERVK_113P63132 956 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ERVK-8P63133 956 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 MYBPHQ13203 477 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZNF267Q14586 743 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SETDB1Q15047 1291 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms