RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 IL18BPO95998 194 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 IFNA16P05015 189 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 HPNP05981 417 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 CD99P14209 185 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 HOXB4P17483 251 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SAT1P21673 171 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SERPINB3P29508 390 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC37A1P57057 533 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SORDQ00796 357 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 DR1Q01658 176 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 PLGLB1Q02325 96 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 CHIT1Q13231 466 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 CUL3Q13618 768 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ZNF460Q14592 562 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SF3B4Q15427 424 aaKnown RBP eCLIP10.32□□□□□ -0.765e-11■■■■■ 36.8
CLSTN3-206ENST00000535668 AP5B1Q2VPB7 878 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 C18orf21Q32NC0 220 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 C10orf62Q5T681 223 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ADNP2Q6IQ32 1131 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 MAATS1Q7Z4T9 603 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ULK2Q8IYT8 1036 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC35F6Q8N357 371 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 FBXO36Q8NEA4 188 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 STAG3L4Q8TBR4 150 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 RBM18Q96H35 190 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 UCN2Q96RP3 112 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ATOH8Q96SQ7 321 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 RBBP8Q99708 897 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 DDX31Q9H8H2 851 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SEMA4BQ9NPR2 832 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 SMYD2Q9NRG4 433 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 PHF11Q9UIL8 331 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ACAD8Q9UKU7 415 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 CNOT11Q9UKZ1 510 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 BOKQ9UMX3 212 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 MTO1Q9Y2Z2 717 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ATRQ13535 2644 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 FREM3P0C091 2139 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 FN1P02751 2386 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 ARID1AO14497 2285 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 A0A0G2JN53 185 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CD8B2A6NJW9 211 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 FAM90A27PA6NNH2 459 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 DYRK3O43781 588 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 LDB3O75112 727 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CDH16O75309 829 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 SNX4O95219 450 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 ZWINTO95229 277 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 GPR75O95800 540 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CELA3AP09093 270 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC35E2BP0CK96 405 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC35E2P0CK97 266 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CCDC166P0CW27 439 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 MTHFD2P13995 350 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 STMN1P16949 149 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 NAGAP17050 411 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 GP5P40197 560 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 DNASE1L1P49184 302 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 PLIN5Q00G26 463 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 TNFRSF17Q02223 184 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 IRF8Q02556 426 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CRYZQ08257 329 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 ASPHQ12797 758 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 PDIA2Q13087 525 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 FASTKD3Q14CZ7 662 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 EBPQ15125 230 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 OR4D1Q15615 310 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 LIPJQ5W064 366 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 VASNQ6EMK4 673 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 OR4C11Q6IEV9 310 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 GRHL2Q6ISB3 625 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 MED27Q6P2C8 311 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CLNKQ7Z7G1 428 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 ADGRE4PQ86SQ3 457 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 GPR180Q86V85 440 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 LACC1Q8IV20 430 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 OR5M9Q8NGP3 310 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CDKL2Q92772 493 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 RNASE6Q93091 150 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 RGMAQ96B86 450 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CFAP36Q96G28 342 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 PWWP2AQ96N64 755 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 RPF2Q9H7B2 306 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 LIN28AQ9H9Z2 209 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 DNAJB12Q9NXW2 375 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 WWOXQ9NZC7 414 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 NUDT4Q9NZJ9 180 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 WHRNQ9P202 907 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 SPRR3Q9UBC9 169 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 ASB4Q9Y574 426 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 CSPG4Q6UVK1 2322 aa10.31□□□□□ -0.76
CLSTN3-206ENST00000535668 TCRBV9S1A1TA0A576 114 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 MBD3L4A6NDZ8 208 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 MBD3L3A6NE82 208 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 MBD3L5A6NJ08 208 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 A6NNC1 897 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 K7EPI3 171 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 FOXE1O00358 373 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 DVL2O14641 736 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 KERAO60938 352 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms