RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CENPNQ96H22 339 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-204ENST00000535005 PPP1R36Q96LQ0 422 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 QRFPRQ96P65 431 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 KCNC2Q96PR1 638 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF717Q9BY31 904 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-204ENST00000535005 ROGDIQ9GZN7 287 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 LHX9Q9NQ69 397 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 PRDM7Q9NQW5 492 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 INIPQ9NRY2 104 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 AGPAT4Q9NRZ5 378 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 STARD5Q9NSY2 213 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 ASIC5Q9NY37 505 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 ADAM29Q9UKF5 820 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 LOXL2Q9Y4K0 774 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 PRORSD1PA6NEY8 169 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 H0YAE9 185 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 UBDO15205 165 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ERI3O43414 337 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SEC22BO75396 215 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 DNAJB5O75953 348 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ALOX5P09917 674 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CCL4P13236 92 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ALOX12P18054 663 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 FASP25445 335 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PLA2G5P39877 138 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CAPGP40121 348 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 HLCSP50747 726 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ARSFP54793 590 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ERVK-8P63133 956 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ACSM2AQ08AH3 577 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 MAD2L1Q13257 205 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 RFTN2Q52LD8 501 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 TMEM198Q66K66 360 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ACSM2BQ68CK6 577 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 OR4C11Q6IEV9 310 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 LCN8Q6JVE9 175 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ISLR2Q6UXK2 745 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CCDC80Q76M96 950 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 TMPRSS7Q7RTY8 843 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SPATA19Q7Z5L4 167 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PPP1R3BQ86XI6 285 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 C1orf52Q8N6N3 182 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 RNF148Q8N7C7 305 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 WDR36Q8NI36 951 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 RAB2BQ8WUD1 216 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 EFHD2Q96C19 240 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 C10orf90Q96M02 699 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SEMA6AQ9H2E6 1030 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 DDX31Q9H8H2 851 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 GPN2Q9H9Y4 310 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PRM3Q9NNZ6 103 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SELENONQ9NZV5 590 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ABCD2Q9UBJ2 740 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ERGIC3Q9Y282 383 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 MRPS2Q9Y399 296 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PCDHB3Q9Y5E6 796 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 HTR3EA5X5Y0 456 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 C4orf51C9J302 202 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SAP18O00422 153 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SOCS2O14508 198 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 POLR1CO15160 346 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SH3BGRLO75368 114 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ATE1O95260 518 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF888P0CJ79 500 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PCSK2P16519 638 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CCNA2P20248 432 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PSMA4P25789 261 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 MSX2P35548 267 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 TARDBPQ13148 414 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■■■ 38.5
SCARB1-204ENST00000535005 RAB39AQ14964 217 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CCNYL2Q5T2Q4 361 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ANKRD26P1Q6NSI1 321 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 GK5Q6ZS86 529 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PAGE2Q7Z2X7 111 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 DGLUCYQ7Z3D6 616 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 COMMD6Q7Z4G1 85 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
SCARB1-204ENST00000535005 MVB12AQ96EY5 273 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 C17orf62Q9BQA9 187 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 BCL7BQ9BQE9 202 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 NEURL2Q9BR09 285 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 ZPBPQ9BS86 351 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 B3GNT4Q9C0J1 378 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 TMEM165Q9HC07 324 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CUTCQ9NTM9 273 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 GIMAP2Q9UG22 337 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 CDC14AQ9UNH5 594 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 SRPK3Q9UPE1 567 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 PCDHGA3Q9Y5H0 932 aa11.63□□□□□ -0.55
SCARB1-204ENST00000535005 A0A1W2PNU3 283 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 DHRS12A0PJE2 317 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 DCDC2BA2VCK2 349 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 PLD2O14939 933 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF749O43361 778 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 FOXS1O43638 330 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 HYAL3O43820 417 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 GALR3O60755 368 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-204ENST00000535005 MYO1DO94832 1006 aa11.62□□□□□ -0.55
SCARB1-204ENST00000535005 MED26O95402 600 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms