RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 PIK3C3Q8NEB9 887 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 OR10Q1Q8NGQ4 319 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 SLC38A5Q8WUX1 472 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 ZNF300Q96RE9 604 aaPredicted RBP12.66□□□□□ -0.38
BEST1-208ENST00000534553 SEMA6CQ9H3T2 930 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 SMURF2Q9HAU4 748 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 C2orf42Q9NWW7 574 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 NDUFAF4Q9P032 175 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 KIF17Q9P2E2 1029 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 ENOPH1Q9UHY7 261 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 POMT2Q9UKY4 750 aa12.66□□□□□ -0.38
BEST1-208ENST00000534553 FAM32AQ9Y421 112 aaKnown RBP12.66□□□□□ -0.38
BEST1-208ENST00000534553 NUP214P35658 2090 aaPredicted RBP12.66□□□□□ -0.38
BEST1-208ENST00000534553 LILRA5A6NI73 299 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 TRIM64CA6NLI5 447 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 TMEM229AB2RXF0 380 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 TLR4O00206 839 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 HMGN4O00479 90 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 EMC8O43402 210 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 BMP10O95393 424 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 PGM3O95394 542 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 AGR2O95994 175 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 BCHEP06276 602 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 ALOX12P18054 663 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 CPN2P22792 545 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 CRISP3P54108 245 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
BEST1-208ENST00000534553 KCNAB2Q13303 367 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 RBM48Q5RL73 367 aaKnown RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 TNFAIP8L2Q6P589 184 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 TMEM179BQ7Z7N9 219 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 SIX5Q8N196 739 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 BBS10Q8TAM1 723 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 SUN3Q8TAQ9 357 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 ADAMTS16Q8TE57 1224 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 PATE1Q8WXA2 126 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 CNRIP1Q96F85 164 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 TMEM19Q96HH6 336 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 MUS81Q96NY9 551 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 MAPKAP1Q9BPZ7 522 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 MACROD1Q9BQ69 325 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 BTBD2Q9BX70 525 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 NPLQ9BXD5 320 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 EXD2Q9NVH0 621 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 DAPP1Q9UN19 280 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 DOLKQ9UPQ8 538 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 MAGED1Q9Y5V3 778 aaPredicted RBP12.65□□□□□ -0.38
BEST1-208ENST00000534553 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 FANCMQ8IYD8 2048 aa12.65□□□□□ -0.38
BEST1-208ENST00000534553 LOC100130705A0A1B0GUX0 176 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 B4DGG1 531 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.39
BEST1-208ENST00000534553 PGRMC2O15173 223 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 IFNW1P05000 195 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 ATP6V1B1P15313 513 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 RHCEP18577 417 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 MATN1P21941 496 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 RRM2P31350 389 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 RYKP34925 604 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 RPL6Q02878 288 aaKnown RBP12.65□□□□□ -0.39
BEST1-208ENST00000534553 ZIK1Q3SY52 487 aaPredicted RBP12.65□□□□□ -0.39
BEST1-208ENST00000534553 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 FAHD1Q6P587 224 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 LRRC25Q8N386 305 aaPredicted RBP12.65□□□□□ -0.39
BEST1-208ENST00000534553 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.39
BEST1-208ENST00000534553 PROX1Q92786 737 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 ZNF681Q96N22 645 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 FOXQ1Q9C009 403 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 CALML5Q9NZT1 146 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 PDP1Q9P0J1 537 aaPredicted RBP12.65□□□□□ -0.39
BEST1-208ENST00000534553 RAB23Q9ULC3 237 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 LIPT1Q9Y234 373 aa12.65□□□□□ -0.39
BEST1-208ENST00000534553 ARRDC5A6NEK1 342 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 H0YGG7 62 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 TNFRSF11BO00300 401 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 STATHP02808 62 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 CELA2BP08218 269 aaPredicted RBP12.64□□□□□ -0.39
BEST1-208ENST00000534553 ANXA8P13928 327 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 ETS2P15036 469 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 TTKP33981 857 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 CASP9P55211 416 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 ARF3P61204 181 aaPredicted RBP12.64□□□□□ -0.39
BEST1-208ENST00000534553 C1orf61Q13536 156 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 C18orf63Q68DL7 685 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 SZRD1Q7Z422 152 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 CCDC116Q8IYX3 515 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 OFCC1Q8IZS5 231 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 HS3ST5Q8IZT8 346 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 LGI4Q8N135 537 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 FRMD1Q8N878 549 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 ATG16L2Q8NAA4 619 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 OR4K14Q8NGD5 310 aa12.64□□□□□ -0.39
BEST1-208ENST00000534553 HDAC2Q92769 488 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms