RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ZNF225Q9UK10 706 aa13.03□□□□□ -0.32
SF3B2-215ENST00000534307 A8MVJ9 347 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 CCL21O00585 134 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 PEX1O43933 1283 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 GPR75O95800 540 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 AIFM1O95831 613 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 GBAP04062 536 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 RHOXF2BP0C7M4 288 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 NR2F6P10588 404 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 COX7A2P14406 83 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-215ENST00000534307 TNNI3P19429 210 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 TLX1P31314 330 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-215ENST00000534307 HSF1Q00613 529 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 PLIN5Q00G26 463 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 GTF3C1Q12789 2109 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 MPEG1Q2M385 716 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 SPRED3Q2MJR0 410 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 LGSNQ5TDP6 509 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 BNC2Q6ZN30 1099 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-215ENST00000534307 LCA5Q86VQ0 697 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 C9orf40Q8IXQ3 194 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 ST13P4Q8IZP2 240 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-215ENST00000534307 SLC34A3Q8N130 599 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 GHDCQ8N2G8 530 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 PSD4Q8NDX1 1056 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 NUBPLQ8TB37 319 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 MZB1Q8WU39 189 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 UCN3Q969E3 161 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 ATP6V1E2Q96A05 226 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 PPWD1Q96BP3 646 aaKnown RBP13.02□□□□□ -0.33
SF3B2-215ENST00000534307 FBXL20Q96IG2 436 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 MAGED4Q96JG8 741 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 DGAT2Q96PD7 388 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 RHOXF2Q9BQY4 288 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 TIMMDC1Q9NPL8 285 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 HPF1Q9NWY4 346 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 TEX10Q9NXF1 929 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-215ENST00000534307 TMEM216Q9P0N5 145 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 ADAM29Q9UKF5 820 aa13.02□□□□□ -0.33
SF3B2-215ENST00000534307 A0A0G2JMM0 328 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 A0A1W2PPB8 328 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 ARHGAP10A1A4S6 786 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 PINLYPA6NC86 204 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 GLOD5A6NK44 160 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 KIR3DP1A8MWS1 328 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 OTCP00480 354 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 CLPSP04118 112 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 PTGER1P34995 402 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 RFC3P40938 356 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 CDH13P55290 713 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 GPR85P60893 370 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 HERVK_113P63132 956 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 ADORA2A-AS1P86434 159 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 SLC29A2Q14542 456 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 CMPK2Q5EBM0 449 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 PIGGQ5H8A4 983 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 FAM219BQ5XKK7 198 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 MTFR2Q6P444 385 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 CYP20A1Q6UW02 462 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 IL20RBQ6UXL0 311 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 MILR1Q7Z6M3 343 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 SREK1Q8WXA9 508 aaKnown RBP13.01□□□□□ -0.33
SF3B2-215ENST00000534307 MTFMTQ96DP5 389 aaKnown RBP13.01□□□□□ -0.33
SF3B2-215ENST00000534307 RBM18Q96H35 190 aaKnown RBP13.01□□□□□ -0.33
SF3B2-215ENST00000534307 ERVK-6Q9BXR3 956 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 MRPL1Q9BYD6 325 aaKnown RBP13.01□□□□□ -0.33
SF3B2-215ENST00000534307 SH2D2AQ9NP31 389 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 FARSBQ9NSD9 589 aaKnown RBP13.01□□□□□ -0.33
SF3B2-215ENST00000534307 COPS7AQ9UBW8 275 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 SH3BGRL2Q9UJC5 107 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 ERVK-11Q9UQG0 969 aa13.01□□□□□ -0.33
SF3B2-215ENST00000534307 ZNF469Q96JG9 3925 aaPredicted RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 EML6Q6ZMW3 1958 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 A0A1W2PS29 197 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 PGRMC2O15173 223 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 ZNHIT1O43257 154 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 HNRNPRO43390 633 aaKnown RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 DLX3O60479 287 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 NADKO95544 446 aaPredicted RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 SLC35E2P0CK97 266 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 TSPAN8P19075 237 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 GALNSP34059 522 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 HSD17B3P37058 310 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 ARL1P40616 181 aaPredicted RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 CASP6P55212 293 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 GALNT1Q10472 559 aaPredicted RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 TBL3Q12788 808 aaKnown RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 IFT88Q13099 833 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 ART3Q13508 389 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 ZNF791Q3KP31 576 aaPredicted RBP13□□□□□ -0.33
SF3B2-215ENST00000534307 KRTAP21-3Q3LHN1 58 aa13□□□□□ -0.33
SF3B2-215ENST00000534307 UNC50Q53HI1 259 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms