RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 WWOXQ9NZC7 414 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 GPRC5BQ9NZH0 403 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CNIH4Q9P003 139 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CNOT11Q9UKZ1 510 aaKnown RBP13.71□□□□□ -0.21
CTSB-230ENST00000534149 CHMP2BQ9UQN3 213 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CSPG4Q6UVK1 2322 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 MED12Q93074 2177 aa13.71□□□□□ -0.22
CTSB-230ENST00000534149 ARID1AO14497 2285 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 FAM95CA0A1B0GW59 222 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 A0A1W2PPR1 153 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 DNALI1O14645 258 aaPredicted RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 TAPBPO15533 448 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 FBXO45P0C2W1 286 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 CPN2P22792 545 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 MSH2P43246 934 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 TAS2R39P59534 338 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 NKX6-1P78426 367 aaPredicted RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 IGLV3-21P80748 117 aaPredicted RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 PPP1R7Q15435 360 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 TGFBIQ15582 683 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 ZC3HC1Q86WB0 502 aaKnown RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 VWA5B2Q8N398 1253 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 SLC15A4Q8N697 577 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 SNX31Q8N9S9 440 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 ESAMQ96AP7 390 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 HSPBAP1Q96EW2 488 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 PTCD3Q96EY7 689 aaKnown RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 ZNF597Q96LX8 424 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 MDFIQ99750 246 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 WDR83Q9BRX9 315 aaKnown RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 ROGDIQ9GZN7 287 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 PRM3Q9NNZ6 103 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 BEX4Q9NWD9 120 aaPredicted RBP13.7□□□□□ -0.22
CTSB-230ENST00000534149 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 CAMK2AQ9UQM7 478 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
CTSB-230ENST00000534149 KIAA1324LA8MWY0 1029 aaPredicted RBP13.69□□□□□ -0.22
CTSB-230ENST00000534149 DYRK3O43781 588 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 TRAPPC6AO75865 159 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 C1QAP02745 245 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 HRGP04196 525 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 HIST1H1TP22492 207 aaPredicted RBP13.69□□□□□ -0.22
CTSB-230ENST00000534149 SERPINB3P29508 390 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 ELK3P41970 407 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 HSPA7P48741 367 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 FNTAP49354 379 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 HERVK_113P63132 956 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 ERVK-8P63133 956 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 SORDQ00796 357 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 NSUN5P2Q63ZY6 315 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 BICRALQ6AI39 1079 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 GAS2L3Q86XJ1 694 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 PM20D2Q8IYS1 436 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 DND1Q8IYX4 353 aaKnown RBP13.69□□□□□ -0.22
CTSB-230ENST00000534149 SRFBP1Q8NEF9 429 aaKnown RBP13.69□□□□□ -0.22
CTSB-230ENST00000534149 NUDT8Q8WV74 236 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 FBXL20Q96IG2 436 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 PBKQ96KB5 322 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 ART5Q96L15 291 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 TRIB1Q96RU8 372 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 TBCDQ9BTW9 1192 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 ERVK-6Q9BXR3 956 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 MS4A8Q9BY19 250 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 PRDM14Q9GZV8 571 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 ERVK-19Q9WJR5 959 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 SLC6A5Q9Y345 797 aa13.69□□□□□ -0.22
CTSB-230ENST00000534149 RTTNQ86VV8 2226 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 GOLGA6L6A8MZA4 724 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 PGRMC1O00264 195 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 SAP18O00422 153 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 TRIM3O75382 744 aaPredicted RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 PRKRAO75569 313 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 SCELO95171 688 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 ACSL3O95573 720 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 LY6G6DO95868 133 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 CTSSP25774 331 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 SSR2P43308 183 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 PLIN5Q00G26 463 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 NTRK2Q16620 822 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 AP5B1Q2VPB7 878 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 DCST1Q5T197 706 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 SHEQ5VZ18 495 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 STEAP4Q687X5 459 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 SLC29A4Q7RTT9 530 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 CXorf67Q86X51 503 aaPredicted RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 SPATA6LQ8N4H0 392 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 BBOF1Q8ND07 529 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 ZNF473Q8WTR7 871 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 DIO2Q92813 273 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 WDR34Q96EX3 536 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 RBM18Q96H35 190 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 KRT12Q99456 494 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 EFCAB11Q9BUY7 163 aa13.68□□□□□ -0.22
CTSB-230ENST00000534149 SORBS1Q9BX66 1292 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 WWTR1Q9GZV5 400 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms