RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 FAM13CQ8NE31 585 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 OR4A15Q8NGL6 344 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 WDR36Q8NI36 951 aaKnown RBP10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 SMIM10Q96HG1 83 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 LRGUKQ96M69 825 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 ZNF285Q96NJ3 590 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 BBS4Q96RK4 519 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 KCTD14Q9BQ13 255 aaPredicted RBP10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 MACROD1Q9BQ69 325 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 NDC1Q9BTX1 674 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 SPATA9Q9BWV2 254 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 NANOGQ9H9S0 305 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 FAM60AQ9NP50 221 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 SEMA3GQ9NS98 782 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 TAS2R9Q9NYW1 312 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 DAPP1Q9UN19 280 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 SRPK3Q9UPE1 567 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 PCDHA9Q9Y5H5 950 aa10.32□□□□□ -0.76
CCDC90B-218ENST00000533761 A0A0G2JN53 185 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 FITM1A5D6W6 292 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SYNDIG1LA6NDD5 238 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 EFCAB7A8K855 629 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 B4E171 279 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 H0YIG0 161 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 FXYD1O00168 92 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PLD2O14939 933 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PROM1O43490 865 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PRAMEF10O60809 474 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PDE5AO76074 875 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SLITRK5O94991 958 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 NSA2O95478 260 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 KRT75O95678 551 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 STATHP02808 62 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 JMJD7P0C870 316 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 FOLR1P15328 257 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TSPAN7P41732 249 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ANXA11P50995 505 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ITGA1P56199 1179 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ELF3P78545 371 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 RIPK1Q13546 671 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TRIM25Q14258 630 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 CAPRIN1Q14444 709 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 KCNAB1Q14722 419 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 DEFB110Q30KQ9 67 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SLC48A1Q6P1K1 146 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 DNAJC14Q6Y2X3 702 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ZNF621Q6ZSS3 439 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ANKRD46Q86W74 232 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 HPS6Q86YV9 775 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 GOT1L1Q8NHS2 421 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 OR5P2Q8WZ92 322 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TANKQ92844 425 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 UTP4Q969X6 686 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 MOAP1Q96BY2 351 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 OR6C1Q96RD1 312 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SLC39A3Q9BRY0 314 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SLC7A5P2Q9GIP4 190 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SLC35C2Q9NQQ7 365 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 FBXO8Q9NRD0 319 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 FGF21Q9NSA1 209 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TEX10Q9NXF1 929 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 FBXW2Q9UKT8 454 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 NAALAD2Q9Y3Q0 740 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 LOXL2Q9Y4K0 774 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ASB4Q9Y574 426 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PCDHB14Q9Y5E9 798 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 COL27A1Q8IZC6 1860 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PTPRBP23467 1997 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TMEM150CB9EJG8 249 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 AGRPO00253 132 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 CLDN4O14493 209 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 POLR1CO15160 346 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 KLHL18O94889 574 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 CPSF4O95639 269 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 AIFM1O95831 613 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 HBQ1P09105 142 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 RNH1P13489 461 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 CD1EP15812 388 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 HOXB6P17509 224 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 GPC1P35052 558 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 MAGEA8P43361 318 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 LIM2P55344 173 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 RAB15P59190 212 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ACTR3P61158 418 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TXNL4AP83876 142 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 MC2RQ01718 297 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 VAC14Q08AM6 782 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TMEM164Q5U3C3 297 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ANKRD26P1Q6NSI1 321 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PROSER1Q86XN7 944 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 KRTAP19-1Q8IUB9 90 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SLC15A3Q8IY34 581 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 TMEM125Q96AQ2 219 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 EXOSC8Q96B26 276 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 CLPTM1LQ96KA5 538 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 PAIP1Q9H074 479 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 RPF2Q9H7B2 306 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 SERHLQ9NQF3 203 aa10.31□□□□□ -0.76
CCDC90B-218ENST00000533761 OCIAD1Q9NX40 245 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms