RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NPIPA1Q9UND3 350 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.27
PHRF1-205ENST00000533464 RETP07949 1114 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 HOXD9P28356 352 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-205ENST00000533464 TAS2R38P59533 333 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 LRP8Q14114 963 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 RGNQ15493 299 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 UGT3A2Q3SY77 523 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 NDUFAF5Q5TEU4 345 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF367Q7RTV3 350 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 SNX29P2Q8IUI4 249 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 FOXJ1Q92949 421 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 NEIL2Q969S2 332 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 PREBQ9HCU5 417 aa16.77■□□□□ 0.27
PHRF1-205ENST00000533464 MUSKO15146 869 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ARSAP15289 507 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 JUNDP17535 347 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 MAGEA3P43357 314 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 GCGRP47871 477 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 SGCBQ16585 318 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 HNRNPA1L2Q32P51 320 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 CPEB1Q9BZB8 566 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 TIGARQ9NQ88 270 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ZDHHC7Q9NXF8 308 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 KNL1Q8NG31 2342 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 CTSCP53634 463 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF33BQ06732 778 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 HNRNPA0Q13151 305 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 RPA4Q13156 261 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 METTL2BQ6P1Q9 378 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 LHFPL3Q86UP9 236 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 SLITRK4Q8IW52 837 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 SLC5A8Q8N695 610 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 TTYH1Q9H313 450 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 MOV10Q9HCE1 1003 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 TBC1D24Q9ULP9 559 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 FOXD2O60548 495 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 SLC6A9P48067 706 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF234Q14588 700 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 WDR45BQ5MNZ6 344 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 LIPIQ6XZB0 460 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ZDHHC12Q96GR4 267 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 SECISBP2Q96T21 854 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ACPTQ9BZG2 426 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF334Q9HCZ1 680 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 PAK1IP1Q9NWT1 392 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 PIAS3Q9Y6X2 628 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 PIM1P11309 404 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 CEBPBP17676 345 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 IL1RNP18510 177 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 OXTRP30559 389 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 DCTP40126 519 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 SLC7A9P82251 487 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 ADAM15Q13444 863 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 MAPK14Q16539 360 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 C7orf57Q8NEG2 295 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 WACQ9BTA9 647 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 TMEM45AQ9NWC5 275 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 APOBEC3BQ9UH17 382 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 PCDHGA10Q9Y5H3 936 aa16.76■□□□□ 0.27
PHRF1-205ENST00000533464 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
PHRF1-205ENST00000533464 S100A1P23297 94 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 HLA-FP30511 346 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CTC1Q2NKJ3 1217 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 GALNT12Q8IXK2 581 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 SDR16C5Q8N3Y7 309 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 JAGN1Q8N5M9 183 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 PPP1R14BQ96C90 147 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 LRR1Q96L50 414 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 NTMT1Q9BV86 223 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 METTL7AQ9H8H3 244 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 SOX1O00570 391 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 HCRTR2O43614 444 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 GPR37L1O60883 481 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 RNH1P13489 461 aaKnown RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 PORP16435 677 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 TAS2R43P59537 309 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 TSPYL5Q86VY4 417 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 GID4Q8IVV7 300 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 PGBD5Q8N414 524 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 UBXN10Q96LJ8 280 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 ERMAPQ96PL5 475 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 TMEM184CQ9NVA4 438 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 RBMXL2O75526 392 aaKnown RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CLCA4Q14CN2 919 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 SLC14A2Q15849 920 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CTSL3PQ5NE16 218 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 NIPAL1Q6NVV3 410 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 FIGNL1Q6PIW4 674 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF517Q6ZMY9 492 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 MYLIPQ8WY64 445 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 TGM7Q96PF1 710 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 EBF1Q9UH73 591 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 EIF1AXP47813 144 aaKnown RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CMPK2Q5EBM0 449 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 ADGRG5Q8IZF4 528 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CENPSQ8N2Z9 138 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 PSD4Q8NDX1 1056 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 SLC30A3Q99726 388 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms