RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SEC16AO15027 2179 aa10.53□□□□□ -0.72
TRAPPC4-211ENST00000533012 MYOCOSA0A1B0GUC4 107 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 TGFBR3LH3BV60 316 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 AKAP10O43572 662 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 OR10H2O60403 315 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 SEC24DO94855 1032 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 LRATO95237 230 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 ITGB2P05107 769 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 G6PDP11413 515 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 COX7A2P14406 83 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 ALOX15P16050 662 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PORP16435 677 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PRPS1L1P21108 318 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 RPL3P39023 403 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 STT3AP46977 705 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 AP2B1P63010 937 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 IGLV3-21P80748 117 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PLIN5Q00G26 463 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 AIMP2Q13155 320 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PCOLCEQ15113 449 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 RPS6KA2Q15349 733 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 ELAVL1Q15717 326 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 EXT1Q16394 746 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 COL28A1Q2UY09 1125 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 LSM12Q3MHD2 195 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 BORAQ6PGQ7 559 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PAPD4Q6PIY7 484 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 R3HCC1LQ7Z5L2 792 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 CPLX4Q7Z7G2 160 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 APLFQ8IW19 511 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 ST13P4Q8IZP2 240 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 CLHC1Q8NHS4 586 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 DAZLQ92904 295 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 EXOSC8Q96B26 276 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PPWD1Q96BP3 646 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 KLHL29Q96CT2 875 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 MTERF3Q96E29 417 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 THOC1Q96FV9 657 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 CHMP6Q96FZ7 201 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 IMMP1LQ96LU5 166 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 OR52B2Q96RD2 323 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 PRPF18Q99633 342 aaKnown RBP10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 CCDC28BQ9BUN5 200 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 NPHS2Q9NP85 383 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 ADAP2Q9NPF8 381 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 SLC35C2Q9NQQ7 365 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 TAS2R7Q9NYW3 318 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 SH3BP4Q9P0V3 963 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 C5AR2Q9P296 337 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 DCTN4Q9UJW0 460 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 MAPRE3Q9UPY8 281 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 KCNMB2Q9Y691 235 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 APC2O95996 2303 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZFHX4Q86UP3 3567 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 GABRR3A8MPY1 467 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 C17orf105B2RV13 164 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 UBDO15205 165 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 CPMP14384 443 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 GALNSP34059 522 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 MPIP34949 423 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 HPCAL1P37235 193 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 FEN1P39748 380 aaKnown RBP10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 CCL11P51671 97 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 DIO3P55073 304 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 CLDN8P56748 225 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 PTGR1Q14914 329 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 TBR1Q16650 682 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 BTBD16Q32M84 506 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 GKAP1Q5VSY0 366 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 IRAK1BP1Q5VVH5 260 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 PLAG1Q6DJT9 500 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 KBTBD2Q8IY47 623 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 MORN4Q8NDC4 146 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 OR14A16Q8NHC5 309 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 M1APQ8TC57 530 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 RIT1Q92963 219 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 PPCDCQ96CD2 204 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 CRELD1Q96HD1 420 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 RILPQ96NA2 401 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 BBS4Q96RK4 519 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 WDR77Q9BQA1 342 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 DPY30Q9C005 99 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 FGFR1OP2Q9NVK5 253 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 EXO1Q9UQ84 846 aaKnown RBP10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 ENTPD4Q9Y227 616 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 LAMA5O15230 3695 aa10.51□□□□□ -0.73
TRAPPC4-211ENST00000533012 IGF2RP11717 2491 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 CFAP47Q6ZTR5 3102 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 A0A0G2JND7 137 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 SAGE2PA6NJ88 616 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 A6NL46 340 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 KLHL41O60662 606 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 TBX19O60806 448 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 SERPINA7P05543 415 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ALDOCP09972 364 aaKnown RBP10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 IDO1P14902 403 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 NT5EP21589 574 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 SOX8P57073 446 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms