RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SNX31Q8N9S9 440 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 MFSD9Q8NBP5 474 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CAMKVQ8NCB2 501 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR4K1Q8NGD4 311 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR2Y1Q8NGV0 311 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 RHEBL1Q8TAI7 183 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 FBLIM1Q8WUP2 373 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 DCAKDQ8WVC6 231 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC13A3Q8WWT9 602 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 NEIL2Q969S2 332 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 FKBP10Q96AY3 582 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 NXNL1Q96CM4 212 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 MMABQ96EY8 250 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 C10orf90Q96M02 699 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 AIF1LQ9BQI0 150 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CCDC77Q9BR77 488 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 TMEM79Q9BSE2 394 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CAPS2Q9BXY5 557 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 MRPL46Q9H2W6 279 aaKnown RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 WDR54Q9H977 334 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SYNPO2LQ9H987 977 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 PELI2Q9HAT8 420 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC22A11Q9NSA0 550 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 TBC1D23Q9NUY8 699 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 DNAJC11Q9NVH1 559 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 PLA2G3Q9NZ20 509 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 NUDT4Q9NZJ9 180 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 PTRH2Q9Y3E5 179 aaKnown RBP5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 MAU2Q9Y6X3 613 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 CACNA1BQ00975 2339 aa5.47□□□□□ -1.53
HMGB1P42-201ENST00000532126 A0A0A6YYC8 382 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 IQANK1A0A1B0GTG1 560 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ARGFXA6NJG6 315 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 TRIM49D1C9J1S8 452 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PTGES3LE9PB15 166 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM229AH3BQW9 127 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 I3L1I5 382 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 UBXN8O00124 270 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PEX12O00623 359 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 P2RX6O15547 441 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 NDUFS4O43181 175 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 LCMT2O60294 686 aaKnown RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCNT2O60583 730 aaKnown RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 GOSR1O95249 250 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 MED26O95402 600 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 SERPIND1P05546 499 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 CELA3BP08861 270 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 SNRPAP09012 282 aaKnown RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 RBP1P09455 135 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 C1GALT1C1LP0DN25 315 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 GFAPP14136 432 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 HOXB4P17483 251 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 FBLP22087 321 aaKnown RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 CXCR2P25025 360 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 TNFRSF8P28908 595 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 OTX2P32243 289 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PGM1P36871 562 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PSMB10P40306 273 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 AVPR1BP47901 424 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ALDH3A2P51648 485 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 CORO7P57737 925 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 REEP5Q00765 189 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 OCA2Q04671 838 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM53BQ14153 422 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 LY6DQ14210 128 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 SSPNQ14714 243 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 RBBP5Q15291 538 aaKnown RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PDK4Q16654 411 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 KRTCAP3Q53RY4 240 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 FBXO48Q5FWF7 155 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 XKR6Q5GH73 641 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF362Q5T0B9 420 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PCSK4Q6UW60 755 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 SHISA6Q6ZSJ9 500 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 COX15Q7KZN9 410 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 LRRC70Q7Z2Q7 622 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 VN1R4Q7Z5H5 301 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAB43Q86YS6 212 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ULK2Q8IYT8 1036 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PDPRQ8NCN5 879 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF740Q8NDX6 193 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 TRPV3Q8NET8 790 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 UBLCP1Q8WVY7 318 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ESAMQ96AP7 390 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 MTBPQ96DY7 904 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 TM4SF19Q96DZ7 209 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 IP6K3Q96PC2 410 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 BBC3Q96PG8 261 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ATOH8Q96SQ7 321 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 MACROD1Q9BQ69 325 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ITPAQ9BY32 194 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 PITHD1Q9GZP4 211 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 DRC3Q9H069 523 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 SLC26A1Q9H2B4 701 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ANKZF1Q9H8Y5 726 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 SMURF2Q9HAU4 748 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 ANKHQ9HCJ1 492 aa5.46□□□□□ -1.54
HMGB1P42-201ENST00000532126 G6PC2Q9NQR9 355 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms