RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 OR10H2O60403 315 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 TGFB1P01137 390 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 C1QAP02745 245 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 HRGP04196 525 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 KCNC1P48547 511 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 HNMTP50135 292 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 HERVK_113P63132 956 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ERVK-8P63133 956 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 RCAN2Q14206 197 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF460Q14592 562 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PPP1R7Q15435 360 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 TSNQ15631 228 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 FBXL19-AS1Q494R0 122 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 EIPR1Q53HC9 387 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 WIPI1Q5MNZ9 446 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 HLA-DQA1Q5Y7H0 255 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 NSUN5P2Q63ZY6 315 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 BICRALQ6AI39 1079 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 POMZP3Q6PJE2 187 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PLXDC2Q6UX71 529 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 DGAT2L6Q6ZPD8 337 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 SYDE1Q6ZW31 735 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 YTHDF3Q7Z739 585 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 YRDCQ86U90 279 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 C9orf40Q8IXQ3 194 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 TAGAPQ8N103 731 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 LRRC25Q8N386 305 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 SPATA6LQ8N4H0 392 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 NAT8LQ8N9F0 302 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ACOT4Q8N9L9 421 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 RDH11Q8TC12 318 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ABTB1Q969K4 478 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 INTS12Q96CB8 462 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PERPQ96FX8 193 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 CERS2Q96G23 380 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PDLIM5Q96HC4 596 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF597Q96LX8 424 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 DACH2Q96NX9 599 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 KCNC2Q96PR1 638 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 BDH2Q9BUT1 245 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 SORBS1Q9BX66 1292 aaKnown RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ERVK-6Q9BXR3 956 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ROGDIQ9GZN7 287 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 RBSNQ9H1K0 784 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 UBTD1Q9HAC8 227 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PROK2Q9HC23 129 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 QPCTLQ9NXS2 382 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 WWOXQ9NZC7 414 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 C6orf203Q9P0P8 240 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 NDRG3Q9UGV2 375 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 ERVK-19Q9WJR5 959 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 OARD1Q9Y530 152 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 PCDHGB3Q9Y5G1 929 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 NSD1Q96L73 2696 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-206ENST00000531430 NCKAP5O14513 1909 aa8.46□□□□□ -1.05
NEDD8-206ENST00000531430 VPS13CQ709C8 3753 aa8.46□□□□□ -1.05
NEDD8-206ENST00000531430 A0A1W2PPR1 153 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 TRIM64A6NGJ6 449 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 TRIM64BA6NI03 449 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 WASHC1A8K0Z3 465 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CAPN14A8MX76 684 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 SNPHO15079 494 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 FGF17O60258 216 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CCNT2O60583 730 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 TTC4O95801 387 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CYP4B1P13584 511 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 EPB42P16452 691 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 BMP7P18075 431 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 ATP5A1P25705 553 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 SSR2P43308 183 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 STT3AP46977 705 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 HSPA7P48741 367 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 SLC12A2P55011 1212 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 FBXW4P57775 412 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 IRF8Q02556 426 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CRYZQ08257 329 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 FOXF2Q12947 444 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CBLBQ13191 982 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 DDX39BQ13838 428 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 DOC2AQ14183 400 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 PPP1R3AQ16821 1122 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 MSS51Q4VC12 460 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 PAGE2BQ5JRK9 111 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF793Q6ZN11 406 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 RNF111Q6ZNA4 994 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CXXC5Q7LFL8 322 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 VN1R5Q7Z5H4 357 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 IGDCC3Q8IVU1 814 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 PRR22Q8IZ63 422 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 SLC15A4Q8N697 577 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 C9orf106Q8NAJ2 232 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 SRFBP1Q8NEF9 429 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 NUBPLQ8TB37 319 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms