RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TM9SF4Q92544 642 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SENP5Q96HI0 755 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM41AQ96HV5 264 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SORBS1Q9BX66 1292 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 POLR2J2Q9GZM3 115 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF768Q9H5H4 540 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RPF1Q9H9Y2 349 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 C11orf16Q9NQ32 467 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF302Q9NR11 478 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NUDT15Q9NV35 164 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RPH3AQ9Y2J0 694 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TDRD15B5MCY1 1934 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 BRWD3Q6RI45 1802 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TRDV1A0A1B0GX56 115 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RAB19A4D1S5 217 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 MTMR11A4FU01 709 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 HMSDA8MTL9 139 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 CDC7O00311 574 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 PEX14O75381 377 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DIRAS1O95057 198 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RAB3BP20337 219 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 LIMS1P48059 325 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 P2RY4P51582 365 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF155Q12901 538 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 LRRC32Q14392 662 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 HLXQ14774 488 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RBBP7Q16576 425 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NTRK2Q16620 822 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 CCDC157Q569K6 752 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 PAN3Q58A45 887 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NOMO2Q5JPE7 1267 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 BTN2A1Q7KYR7 527 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TSEN54Q7Z6J9 526 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM17Q86X19 198 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 FAM217AQ8IXS0 508 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 FAM46DQ8NEK8 389 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 OR10Q1Q8NGQ4 319 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SPATA22Q8NHS9 363 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TADA1Q96BN2 335 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ELP4Q96EB1 424 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 OR52E6Q96RD3 313 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 OSMRQ99650 979 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NLNQ9BYT8 704 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DPY30Q9C005 99 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SAP130Q9H0E3 1048 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NSUN3Q9H649 340 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 GSTK1Q9Y2Q3 226 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ANAPC1Q9H1A4 1944 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ANXA2P2A6NMY6 339 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 MCRIP1C9JLW8 97 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 GALR3O60755 368 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 PRAF2O60831 178 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 KCNK5O95279 499 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 POP4O95707 220 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 MT-CYBP00156 380 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 VTNP04004 478 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 THP07101 528 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 GIPP09681 153 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 GABRA1P14867 456 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 PPP3CBP16298 524 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 GPX2P18283 190 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 MAPK3P27361 379 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RBMS1P29558 406 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 EIF2S3P41091 472 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TSPAN5P62079 268 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NR6A1Q15406 480 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZBTB6Q15916 424 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DPH6Q7L8W6 267 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 VTCN1Q7Z7D3 282 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TRPV1Q8NER1 839 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 MDGA1Q8NFP4 955 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 UPF1Q92900 1129 aaKnown RBP eCLIP7.75□□□□□ -1.172e-6■■□□□ 14.2
CSDE1-214ENST00000530886 WNT8BQ93098 351 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RAB7BQ96AH8 199 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF285Q96NJ3 590 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 THAP7Q9BT49 309 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 AARSD1Q9BTE6 412 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 BTBD1Q9H0C5 482 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ABCG5Q9H222 651 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RNF122Q9H9V4 155 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF334Q9HCZ1 680 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 NPDC1Q9NQX5 325 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 CYSLTR2Q9NS75 346 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 CLEC2DQ9UHP7 191 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DMRT1Q9Y5R6 373 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 HELZP42694 1942 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 L7N2F9 121 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 TNFRSF11BO00300 401 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 ATG12O94817 140 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PEX11BO96011 259 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SOD1P00441 154 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 OGNP20774 298 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 GALP22466 123 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PAX6P26367 422 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 GABRA5P31644 462 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CHRNA4P43681 627 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CRYBA2P53672 197 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 IRF5Q13568 498 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SNTB1Q13884 538 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms