RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 ERFP50548 548 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 FOXC1Q12948 553 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 GAB1Q13480 694 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 RUNX2Q13950 521 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 CEBPEQ15744 281 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 CYP51A1Q16850 503 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 CPZQ66K79 652 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 C18orf63Q68DL7 685 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 OR52E8Q6IFG1 317 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 TMEM71Q6P5X7 295 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 ERMP1Q7Z2K6 904 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 TMPRSS9Q7Z410 1059 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 SLC41A2Q96JW4 573 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 NSMCE2Q96MF7 247 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 PIF1Q9H611 641 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 KLHL3Q9UH77 587 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 WASF3Q9UPY6 502 aa19.99■□□□□ 0.79
VPS28-212ENST00000530836 MYO1GB0I1T2 1018 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 PGRMC2O15173 223 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 HCRTR1O43613 425 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 HYAL3O43820 417 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 GPIP06744 558 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 CSNK2A2P19784 350 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 ATP6V1B2P21281 511 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 SLC7A1P30825 629 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 CHI3L1P36222 383 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 POLE2P56282 527 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 GRM7Q14831 915 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 RGNQ15493 299 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 ZNF574Q6ZN55 896 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 PACS2Q86VP3 889 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 SPPL2CQ8IUH8 684 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 D2HGDHQ8N465 521 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 DTWD1Q8N5C7 304 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 OR4D9Q8NGE8 314 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 OR52N2Q8NGI0 321 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 ADAMTS18Q8TE60 1221 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 KLHL6Q8WZ60 621 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 AMDHD1Q96NU7 426 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 DEPDC7Q96QD5 511 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 DPH2Q9BQC3 489 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 RPF2Q9H7B2 306 aaKnown RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 C6orf203Q9P0P8 240 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 BLACEA4D250 179 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 HOXB6P17509 224 aaKnown RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 PSMA4P25789 261 aaKnown RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 MAGEA8P43361 318 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 PDX1P52945 283 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 ZFP36L1Q07352 338 aaKnown RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 ISXQ2M1V0 245 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 TTC29Q8NA56 475 aaPredicted RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 SLAMF7Q9NQ25 335 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 SEMA3GQ9NS98 782 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 C5AR2Q9P296 337 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 PDP2Q9P2J9 529 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 MRPS2Q9Y399 296 aaKnown RBP19.98■□□□□ 0.79
VPS28-212ENST00000530836 AP4S1Q9Y587 144 aa19.98■□□□□ 0.79
VPS28-212ENST00000530836 HYKKA2RU49 373 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 GLOD5A6NK44 160 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 H3BNX3 289 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 ERAL1O75616 437 aaKnown RBP19.97■□□□□ 0.79
VPS28-212ENST00000530836 NSA2O95478 260 aaKnown RBP19.97■□□□□ 0.79
VPS28-212ENST00000530836 ANKRD34CP0C6C1 535 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 NELFEP18615 380 aaKnown RBP19.97■□□□□ 0.79
VPS28-212ENST00000530836 SOAT1P35610 550 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 NCBP2P52298 156 aaKnown RBP eCLIP19.97■□□□□ 0.795e-6■■□□□ 11.5
VPS28-212ENST00000530836 TARDBPQ13148 414 aaKnown RBP eCLIP19.97■□□□□ 0.79
VPS28-212ENST00000530836 VEZF1Q14119 521 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 FAM214AQ32MH5 1076 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 BHLHB9Q6PI77 547 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 TMEM64Q6YI46 380 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 PDSS2Q86YH6 399 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 TMEM126BQ8IUX1 230 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 SLITRK4Q8IW52 837 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 TANKQ92844 425 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 MOAP1Q96BY2 351 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 TRIM4Q9C037 500 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 GLIPR2Q9H4G4 154 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 ZNF768Q9H5H4 540 aaKnown RBP19.97■□□□□ 0.79
VPS28-212ENST00000530836 CXorf36Q9H7Y0 433 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 STARD5Q9NSY2 213 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 ARMC1Q9NVT9 282 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 IRAK4Q9NWZ3 460 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 TMEM9Q9P0T7 183 aa19.97■□□□□ 0.79
VPS28-212ENST00000530836 DHRS12A0PJE2 317 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 FAM149AA5PLN7 773 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 TMX2-CTNND1H3BSU7 103 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 CXCR6O00574 342 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 CSO75390 466 aaKnown RBP19.96■□□□□ 0.79
VPS28-212ENST00000530836 BAG2O95816 211 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 IL10P22301 178 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 RAB38P57729 211 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 RBBP4Q09028 425 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 HSPB3Q12988 150 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 VMACQ2NL98 169 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 B3GNT8Q7Z7M8 397 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 OR4K14Q8NGD5 310 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 NEURL3Q96EH8 262 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 C10orf90Q96M02 699 aa19.96■□□□□ 0.79
VPS28-212ENST00000530836 FANCEQ9HB96 536 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms