RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 SIGLEC12Q96PQ1 595 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 PAXXQ9BUH6 204 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 THUMPD3Q9BV44 507 aaKnown RBP2.06□□□□□ -2.08
NUP98-218ENST00000530516 ST6GALNAC5Q9BVH7 336 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 LRRC2Q9BYS8 371 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 WWP1Q9H0M0 922 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 TNMDQ9H2S6 317 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 ZDHHC6Q9H6R6 413 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 IL1RL2Q9HB29 575 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 ZCCHC17Q9NP64 241 aaKnown RBP2.06□□□□□ -2.08
NUP98-218ENST00000530516 AMBNQ9NP70 447 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 ZNF275Q9NSD4 429 aaPredicted RBP2.06□□□□□ -2.08
NUP98-218ENST00000530516 VNN3Q9NY84 501 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 TECRQ9NZ01 308 aaKnown RBP2.06□□□□□ -2.08
NUP98-218ENST00000530516 CDH7Q9ULB5 785 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 EXOC6BQ9Y2D4 811 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 ACEP12821 1306 aa2.06□□□□□ -2.08
NUP98-218ENST00000530516 IGHV3-35A0A0C4DH35 117 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 OOEPA6NGQ2 149 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 SDR42E2A6NKP2 422 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 RNF212BA8MTL3 300 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 E7ENQ6 273 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 WDR46O15213 610 aaKnown RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 ATP9AO75110 1047 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 ANXA9O76027 345 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 PRB2P02812 416 aaPredicted RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 FCGR3AP08637 254 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 PAX2Q02962 417 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 OR1C1Q15619 314 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 ACKR1Q16570 336 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 TTC31Q49AM3 519 aaPredicted RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 C9orf129Q5T035 196 aaKnown RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 MSANTD1Q6ZTZ1 278 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 VASH2Q86V25 355 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 C17orf64Q86WR6 236 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 VSIG1Q86XK7 387 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 SIAH3Q8IW03 269 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 ZNF444Q8N0Y2 327 aaPredicted RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 ATAD1Q8NBU5 361 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 BEST4Q8NFU0 473 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 OR7G3Q8NG95 312 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 ZNF671Q8TAW3 534 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 TBCKQ8TEA7 893 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 AFAP1L1Q8TED9 768 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 RAB3CQ96E17 227 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 ZMAT2Q96NC0 199 aaKnown RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 PANX3Q96QZ0 392 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 AGPAT1Q99943 283 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 DPEP3Q9H4B8 488 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 TMEM206Q9H813 350 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.05□□□□□ -2.08
NUP98-218ENST00000530516 SEPT10Q9P0V9 454 aa2.05□□□□□ -2.08
NUP98-218ENST00000530516 TDRD6O60522 2096 aaKnown RBP2.05□□□□□ -2.08
NUP98-218ENST00000530516 GLCEO94923 617 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 SLU7O95391 586 aaKnown RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 GH1P01241 217 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 EPOP01588 193 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 EZRP15311 586 aaKnown RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 GDF1P27539 372 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 TNFSF10P50591 281 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 RBP5P82980 135 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 GABPAQ06546 454 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 RFTN1Q14699 578 aaPredicted RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 EMC2Q15006 297 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 MEP1BQ16820 701 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 PPP1R3AQ16821 1122 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 NHSL2Q5HYW2 709 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 FAM219BQ5XKK7 198 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 DMKNQ6E0U4 476 aaPredicted RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 ABRAXAS1Q6UWZ7 409 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 GCNT7Q6ZNI0 430 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 Q6ZRG5 221 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 FAM205AQ6ZU69 1335 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 LAX1Q8IWV1 398 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 GANCQ8TET4 914 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 UBLCP1Q8WVY7 318 aaPredicted RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 TCP11Q8WWU5 503 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 GGHQ92820 318 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 PHYHIPLQ96FC7 376 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 C16orf58Q96GQ5 468 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 CAPNS2Q96L46 248 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 S1PR3Q99500 378 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 CITED2Q99967 270 aaPredicted RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 IKZF5Q9H5V7 419 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 PDFQ9HBH1 243 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 ABCC13Q9NSE7 274 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 ARMCX3Q9UH62 379 aaPredicted RBP2.04□□□□□ -2.08
NUP98-218ENST00000530516 CLEC4EQ9ULY5 219 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 MOKQ9UQ07 419 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 NTNG1Q9Y2I2 539 aa2.04□□□□□ -2.08
NUP98-218ENST00000530516 IGHV3OR16-12A0A075B7B8 117 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 CCT8L1PA6NM43 557 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 HMGB1P1B2RPK0 211 aaPredicted RBP2.03□□□□□ -2.08
NUP98-218ENST00000530516 HDAC3O15379 428 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 TBCAO75347 108 aaKnown RBP2.03□□□□□ -2.08
NUP98-218ENST00000530516 RAD51DO75771 328 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 STBD1O95210 358 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 CPNE6O95741 557 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 IGHV3-9P01782 118 aa2.03□□□□□ -2.08
NUP98-218ENST00000530516 NUDT17P0C025 328 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms