RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 WDR49Q8IV35 697 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 NUP37Q8NFH4 326 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 U2AF1L4Q8WU68 220 aaKnown RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 LIPHQ8WWY8 451 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 HIST1H2ACQ93077 130 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 RAB40CQ96S21 281 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 SYT15Q9BQS2 421 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 JPH2Q9BR39 696 aaPredicted RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 MCRIP2Q9BUT9 160 aaKnown RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 FUNDC2Q9BWH2 189 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 WWP1Q9H0M0 922 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 CXXC4Q9H2H0 198 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 GDF3Q9NR23 364 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 TBK1Q9UHD2 729 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 WIPI2Q9Y4P8 454 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 ZHX2Q9Y6X8 837 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 ZMYM6O95789 1325 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 LOC105371242A0A075B767 164 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 IGHV3-20A0A0C4DH32 117 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 TMEM89A2RUT3 159 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 A8MU76 341 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 K7EQD1 137 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 KIAA0513O60268 411 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 SORBS2O94875 1100 aaKnown RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 NXPH4O95158 308 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 GUCA1CO95843 209 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 PDGFBP01127 241 aaPredicted RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 CALCAP01258 141 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 RPLP0P05388 317 aaKnown RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 LYNP07948 512 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 TPM2P07951 284 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 SELEP16581 610 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 CCND2P30279 289 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 AKT2P31751 481 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 MMP12P39900 470 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ZFP36L2P47974 494 aaKnown RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 NUMBP49757 651 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ITPK1Q13572 414 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 DPYSQ14117 519 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 EXOSC7Q15024 291 aaKnown RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 SLC1A5Q15758 541 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 FAM189A2Q15884 450 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 CARTPTQ16568 116 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 LPAL2Q16609 132 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 RFTN2Q52LD8 501 aaPredicted RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 GPAT3Q53EU6 434 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 CMPK2Q5EBM0 449 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 C1orf189Q5VU69 101 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 RTL6Q6ICC9 239 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 FAM159AQ6UWV7 190 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 Q71RC1 249 aaPredicted RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 RPAINQ86UA6 219 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 GTSCR1Q86UQ5 136 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ITIH5Q86UX2 942 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 RNF148Q8N7C7 305 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 GVQW1Q8N7I0 195 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF614Q8N883 585 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 FAM71CQ8NEG0 241 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 OR9Q2Q8NGE9 314 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 OR10G7Q8NGN6 311 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 TCP11Q8WWU5 503 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 N4BP2L2Q92802 583 aaPredicted RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 C11orf52Q96A22 123 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 CNRIP1Q96F85 164 aaPredicted RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 C16orf58Q96GQ5 468 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 USP28Q96RU2 1077 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ATOH8Q96SQ7 321 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 TRIM51Q9BSJ1 452 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 UBE2TQ9NPD8 197 aaPredicted RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 B3GAT2Q9NPZ5 323 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 HPS4Q9NQG7 708 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 SOHLH2Q9NX45 425 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ERVK-18Q9QC07 812 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 DIMT1Q9UNQ2 313 aaKnown RBP3.83□□□□□ -1.8
C11orf88-204ENST00000529661 IKBKGQ9Y6K9 419 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 KIF7Q2M1P5 1343 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 ATAD2BQ9ULI0 1458 aa3.83□□□□□ -1.8
C11orf88-204ENST00000529661 NCAPD2Q15021 1401 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 RGSL1A5PLK6 1076 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 OR5H15A6NDH6 313 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 KRTAP16-1A8MUX0 517 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 G3V2L1 256 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 H7C423 109 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 INPP4BO15327 924 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 CSO75390 466 aaKnown RBP3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SYNGR4O95473 234 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 FUT1P19526 365 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 PDHA2P29803 388 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 ACADSBP45954 432 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SLC6A8P48029 635 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 CAMLGP49069 296 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 CRYBA2P53672 197 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 NLRP11P59045 1033 aaKnown RBP3.82□□□□□ -1.8
C11orf88-204ENST00000529661 CDKL1Q00532 357 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 RBBP4Q09028 425 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SPP2Q13103 211 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 PDIA5Q14554 519 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 KARSQ15046 597 aaKnown RBP3.82□□□□□ -1.8
C11orf88-204ENST00000529661 TRADDQ15628 312 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms