RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	TRAPPC6A	O75865	159 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	LRAT	O95237	230 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ACSL3	O95573	720 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	C1QA	P02745	245 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	S100B	P04271	92 aa	Predicted RBP	10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	IGKV3-11	P04433	115 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CD1D	P15813	335 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	EPOR	P19235	508 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	BMP5	P22003	454 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SERPINB3	P29508	390 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ADAM8	P78325	824 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	DR1	Q01658	176 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	BIK	Q13323	160 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ZNF267	Q14586	743 aa	Predicted RBP	10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TBCC	Q15814	346 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CDKL4	Q5MAI5	379 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	FBXW10	Q5XX13	1052 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	C18orf63	Q68DL7	685 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	MED27	Q6P2C8	311 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ULK2	Q8IYT8	1036 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	MMP21	Q8N119	569 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	OR10G3	Q8NGC4	313 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	NEIL3	Q8TAT5	605 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PAQR8	Q8TEZ7	354 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TANK	Q92844	425 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	EXT2	Q93063	718 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SPACA9	Q96E40	222 aa	Predicted RBP	10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	LRRC46	Q96FV0	321 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TSPAN17	Q96FV3	270 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GAL3ST4	Q96RP7	486 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CD244	Q9BZW8	370 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	OR51B5	Q9H339	312 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	NSMCE4A	Q9NXX6	385 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	B4GALT7	Q9UBV7	327 aa		10.46	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SPG11	Q96JI7	2443 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840		A6NNC1	897 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	CXorf49	A8MYA2	514 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	KDM4E	B2RXH2	506 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	DVL2	O14641	736 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	WISP3	O95389	354 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	EPPIN	O95925	133 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	SSTR1	P30872	391 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TLX1	P31314	330 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	GMPR	P36959	345 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	PEX19	P40855	299 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	CASP2	P42575	452 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	SSR2	P43308	183 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ATP6V0D1	P61421	351 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	HERVK_113	P63132	956 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ERVK-8	P63133	956 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TBL3	Q12788	808 aa	Known RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	DUSP8	Q13202	625 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	DEPDC1	Q5TB30	811 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	KHDRBS2	Q5VWX1	349 aa	Known RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TMEM198	Q66K66	360 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TMEM64	Q6YI46	380 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	SLC29A4	Q7RTT9	530 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	GPR180	Q86V85	440 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ZBED8	Q8IZ13	594 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	LRRC25	Q8N386	305 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	FBXW8	Q8N3Y1	598 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RNF175	Q8N4F7	328 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RELL2	Q8NC24	303 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	NAXE	Q8NCW5	288 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	BBOF1	Q8ND07	529 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	OR7G3	Q8NG95	312 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	FAM222B	Q8WU58	562 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RIT1	Q92963	219 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RNASE6	Q93091	150 aa	Known RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	UBE2E3	Q969T4	207 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RGMA	Q96B86	450 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	CMTM7	Q96FZ5	175 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TIMP4	Q99727	224 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	MCMBP	Q9BTE3	642 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	DOHH	Q9BU89	302 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ERVK-6	Q9BXR3	956 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	MS4A12	Q9NXJ0	267 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TXNDC16	Q9P2K2	825 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RNF112	Q9ULX5	631 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ERVK-19	Q9WJR5	959 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	SNX24	Q9Y343	169 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	PCDHGB3	Q9Y5G1	929 aa		10.45	□□□□□ -0.74
PTP4A2-211	ENST00000528840	LRRC3C	A6NJW4	275 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	GLOD5	A6NK44	160 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	TP73	O15350	636 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	OR10H2	O60403	315 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	PRKRA	O75569	313 aa	Known RBP	10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	SEC31A	O94979	1220 aa	Known RBP	10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	FBXO45	P0C2W1	286 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ALOX15	P16050	662 aa	Predicted RBP	10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	STMN1	P16949	149 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	GDF1	P27539	372 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	CEACAM8	P31997	349 aa	Predicted RBP	10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	ASCL1	P50553	236 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	RAP1GDS1	P52306	607 aa		10.44	□□□□□ -0.74
PTP4A2-211	ENST00000528840	AGFG1	P52594	562 aa	Known RBP	10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms