RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 IRF5Q13568 498 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 SEC23BQ15437 767 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 CDKN3Q16667 212 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF284Q2VY69 593 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 FLYWCH1Q4VC44 716 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 KLHL22Q53GT1 634 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 OR2G6Q5TZ20 316 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 CXCL17Q6UXB2 119 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 QSOX2Q6ZRP7 698 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 TSPAN33Q86UF1 283 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 CBARPQ8N350 705 aaPredicted RBP13.96□□□□□ -0.18
CAPN1-214ENST00000528165 UFD1Q92890 307 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 GPR137Q96N19 417 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 KCNJ15Q99712 375 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 C17orf62Q9BQA9 187 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 PIGUQ9H490 435 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 CWH43Q9H720 699 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 FOLH1BQ9HBA9 442 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 DNAH12Q6ZR08 3092 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 MYADML2A6NDP7 307 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SNTNA6NMZ2 147 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 H0YIV9 168 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 GFYI3L273 518 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SGK494L7N484 410 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SLC16A5O15375 505 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 LRRTM2O43300 516 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 RECKO95980 971 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 ARAFP10398 606 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 RGS1Q08116 209 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 TYW3Q6IPR3 259 aaKnown RBP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 GRHL2Q6ISB3 625 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 IQCF1Q8N6M8 205 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 LRRC17Q8N6Y2 441 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF680Q8NEM1 530 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 CLP1Q92989 425 aaKnown RBP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 CIDECQ96AQ7 238 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 MED8Q96G25 268 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 GPBP1L1Q9HC44 474 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 MRPL39Q9NYK5 338 aaKnown RBP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 ATP6V1HQ9UI12 483 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 EXO1Q9UQ84 846 aaKnown RBP13.95□□□□□ -0.18
CAPN1-214ENST00000528165 NCKAP1Q9Y2A7 1128 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 Q9Y3F1 56 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 OR6C75A6NL08 312 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SLC38A8A6NNN8 435 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 AGAP14A8MT82 685 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 SYN3O14994 580 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 PRKYO43930 277 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 STC2O76061 302 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 UBE3AQ05086 875 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 CCL14Q16627 93 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 ATP13A5Q4VNC0 1218 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 GHDCQ8N2G8 530 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 PLA2G15Q8NCC3 412 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 GATAD2BQ8WXI9 593 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 ASIC4Q96FT7 647 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 MED28Q9H204 178 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 COQ3Q9NZJ6 369 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 MGAT4AQ9UM21 535 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 KCNE2Q9Y6J6 123 aa13.95□□□□□ -0.18
CAPN1-214ENST00000528165 TMEM189-UBE2V1I3L0A0 370 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 FAAHO00519 579 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 ELAVL4P26378 380 aaKnown RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 GABRA5P31644 462 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 AVPR1BP47901 424 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 PTPN5P54829 565 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 FABP5Q01469 135 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 DSC1Q08554 894 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 SYT14P1Q58G82 188 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 USP45Q70EL2 814 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 FAM26EQ8N5C1 309 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 PLD4Q96BZ4 506 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 PPCDCQ96CD2 204 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 LRR1Q96L50 414 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 ZSCAN5AQ9BUG6 496 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 C1QTNF7Q9BXJ2 289 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 HDHD2Q9H0R4 259 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 C12orf4Q9NQ89 552 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 LZTS3O60299 673 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 TSPAN9O75954 239 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 SRPRAP08240 638 aaKnown RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF8P17098 575 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF763Q0D2J5 394 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 TPBGQ13641 420 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 C3orf38Q5JPI3 329 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 MZT2AQ6P582 158 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 TEFMQ96QE5 360 aaKnown RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 ATF6BQ99941 703 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 NT5DC2Q9H857 520 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 MBD1Q9UIS9 605 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 ADAM30Q9UKF2 790 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 POLHQ9Y253 713 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms