RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DIAPH2O60879 1101 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 DNAJB5O75953 348 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 LRATO95237 230 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 IGKV3-11P04433 115 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 SLC35E2P0CK97 266 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 LAMP1P11279 417 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 CPMP14384 443 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 DRD4P21917 467 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 GPX3P22352 226 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 TLX1P31314 330 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 FEN1P39748 380 aaKnown RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 STT3AP46977 705 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 MRPL19P49406 292 aaKnown RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 XKP51811 444 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 TMPRSS3P57727 454 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 UFM1P61960 85 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 CXADRP78310 365 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.84e-7■■■□□ 16.8
NEDD8-205ENST00000527046 DUSP8Q13202 625 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 TBR1Q16650 682 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 ST3GAL2Q16842 350 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 DEFB109BQ30KR1 87 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 DCAF10Q5QP82 559 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 MFSD4BQ5TF39 518 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 OR52E8Q6IFG1 317 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 FAM111BQ6SJ93 734 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 IKBIPQ70UQ0 350 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 NDUFAF7Q7L592 441 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 RAB43Q86YS6 212 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 APLFQ8IW19 511 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 ZSCAN1Q8NBB4 408 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 OR7A2PQ8NGA2 310 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 OR4K14Q8NGD5 310 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 CEP70Q8NHQ1 597 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 ELP5Q8TE02 316 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 THAP4Q8WY91 577 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 TTC9Q92623 222 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 MARK4Q96L34 752 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 NPAS2Q99743 824 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 REEP4Q9H6H4 257 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 NPHS2Q9NP85 383 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 PFDN4Q9NQP4 134 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 SLC35C2Q9NQQ7 365 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 SDR39U1Q9NRG7 319 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 NOP53Q9NZM5 478 aaKnown RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF639Q9UID6 485 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 DCTN4Q9UJW0 460 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ARGFXA6NJG6 315 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 K7EM74 188 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 PCDH17O14917 1159 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 SCAMP2O15127 329 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 PRKNO60260 465 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 GUCY1B2O75343 617 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CEACAM4O75871 244 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 MYO1DO94832 1006 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 SEC24DO94855 1032 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 HPP00738 406 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 VIMP08670 466 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 GALNSP34059 522 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ALDH9A1P49189 494 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 UCNP55089 124 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 OR4D2P58180 307 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 SLC26A5P58743 744 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 MAP4K2Q12851 820 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CHAF1BQ13112 559 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 HEPACAMQ14CZ8 416 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 LTB4RQ15722 352 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 COL28A1Q2UY09 1125 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 FHL5Q5TD97 284 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 BROXQ5VW32 411 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 H3F3CQ6NXT2 135 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 PAPD4Q6PIY7 484 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CAMKMTQ7Z624 323 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CCDC116Q8IYX3 515 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ST13P4Q8IZP2 240 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 TMEM132CQ8N3T6 1108 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 KIF2BQ8N4N8 673 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF721Q8TF20 911 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 C10orf82Q8WW14 230 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CIDECQ96AQ7 238 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 EXOSC8Q96B26 276 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 MTERF3Q96E29 417 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CHMP6Q96FZ7 201 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 NUDT9Q9BW91 350 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 FAIM2Q9BWQ8 316 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 TMEM120AQ9BXJ8 343 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 SEMA4CQ9C0C4 833 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 GLIPR2Q9H4G4 154 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 CXorf21Q9HAI6 301 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF160Q9HCG1 818 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ADAP2Q9NPF8 381 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 TCF7L2Q9NQB0 619 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms