RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 POU3F4P49335 361 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 PGFP49763 221 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 SERPINB8P50452 374 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 TKTL1P51854 596 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 LIMK2P53671 638 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 OTUD4Q01804 1114 aaKnown RBP3.22□□□□□ -1.89
CD44-217ENST00000525348 RBPJQ06330 500 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 ENPEPQ07075 957 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 CD300CQ08708 224 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 RIGQ13278 110 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 CUL1Q13616 776 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 DOC2AQ14183 400 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 STK38Q15208 465 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 NONOQ15233 471 aaKnown RBP eCLIP3.22□□□□□ -1.89
CD44-217ENST00000525348 CRY2Q49AN0 593 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 SUSD4Q5VX71 490 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 SHEQ5VZ18 495 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 GPR139Q6DWJ6 353 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 NOTUMQ6P988 496 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 ZYG11AQ6WRX3 759 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 SLC47A2Q86VL8 602 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 VSIG1Q86XK7 387 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 ITPRIPQ8IWB1 547 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 C12orf56Q8IXR9 622 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 METTL4Q8N3J2 472 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 FAM89BQ8N5H3 189 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 POMGNT2Q8NAT1 580 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 NOA1Q8NC60 698 aaKnown RBP3.22□□□□□ -1.89
CD44-217ENST00000525348 OR2L2Q8NH16 312 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 OPTNQ96CV9 577 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 TMA16Q96EY4 203 aaKnown RBP3.22□□□□□ -1.89
CD44-217ENST00000525348 RPRD1AQ96P16 312 aaPredicted RBP3.22□□□□□ -1.89
CD44-217ENST00000525348 TMEM237Q96Q45 408 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 RHOXF2Q9BQY4 288 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 NUDT16L1Q9BRJ7 211 aaKnown RBP3.22□□□□□ -1.89
CD44-217ENST00000525348 DRC3Q9H069 523 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 B3GAT2Q9NPZ5 323 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 C8orf4Q9NR00 106 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 GSN-AS1Q9NRJ2 163 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 SLC39A1Q9NY26 324 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 EMC3Q9P0I2 261 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 VPS18Q9P253 973 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 EXTL2Q9UBQ6 330 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 SLC7A8Q9UHI5 535 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 VANGL2Q9ULK5 521 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 RPH3AQ9Y2J0 694 aaPredicted RBP3.22□□□□□ -1.89
CD44-217ENST00000525348 ASB3Q9Y575 518 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 CPDO75976 1380 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 CROCCQ5TZA2 2017 aa3.22□□□□□ -1.89
CD44-217ENST00000525348 IGSF1Q8N6C5 1336 aa3.21□□□□□ -1.89
CD44-217ENST00000525348 ACOD1A6NK06 481 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ASB14A6NK59 587 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 L7N2F9 121 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 SPOPO43791 374 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 MGRN1O60291 552 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 KLHL2O95198 593 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 CHRNA1P02708 482 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 OPN1MWP04001 364 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ALOX5P09917 674 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 OPN1MW2P0DN77 364 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 OPN1MW3P0DN78 364 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 PRKAR1AP10644 381 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 PDHBP11177 359 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 PRKACAP17612 351 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ACHEP22303 614 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 CPT2P23786 658 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 HNMTP50135 292 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 PPP5CP53041 499 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 MTTPP55157 894 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 OR1D5P58170 312 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 DCDC1P59894 354 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 VBP1P61758 197 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 CDC20Q12834 499 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 CYLC2Q14093 348 aaPredicted RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 KLHL38Q2WGJ6 581 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 FBXO48Q5FWF7 155 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ATL3Q6DD88 541 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 RPUSD3Q6P087 351 aaKnown RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 CYB5D1Q6P9G0 228 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 SHQ1Q6PI26 577 aaKnown RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 C11orf88Q6PI97 169 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 C15orf52Q6ZUT6 534 aaKnown RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 SLC24A5Q71RS6 500 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 BZW1Q7L1Q6 419 aaKnown RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 FCRLAQ7L513 359 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ZFAND4Q86XD8 727 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 CDH26Q8IXH8 852 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 LRRC34Q8IZ02 419 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 MAML2Q8IZL2 1156 aaPredicted RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 SLC38A6Q8IZM9 456 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ABHD12Q8N2K0 398 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ARHGAP18Q8N392 663 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 CSGALNACT2Q8N6G5 542 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 POM121L12Q8N7R1 296 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 ZNF680Q8NEM1 530 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 TTLQ8NG68 377 aa3.21□□□□□ -1.9
CD44-217ENST00000525348 C9orf43Q8TAL5 461 aaPredicted RBP3.21□□□□□ -1.9
CD44-217ENST00000525348 DQX1Q8TE96 717 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms