RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 SLC2A5P22732 501 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 MEDAGQ5VYS4 303 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 PIGWQ7Z7B1 504 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF679Q8IYX0 411 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 OR13C4Q8NGS5 318 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 PELOQ9BRX2 385 aaKnown RBP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ACAD8Q9UKU7 415 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 PNPP00491 289 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 HOXC6P09630 235 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 PRKCAP17252 672 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 PYCR1P32322 319 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 MALLQ13021 153 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 HGSNATQ68CP4 663 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 MEX3BQ6ZN04 569 aaKnown RBP13.15□□□□□ -0.31
LRRK1-202ENST00000525284 GTF2H4Q92759 462 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 RAB8BQ92930 207 aa13.15□□□□□ -0.31
LRRK1-202ENST00000525284 ADGRB1O14514 1584 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 CBR1P16152 277 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 FOXN2P32314 431 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 NDUFA6P56556 154 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 YBEYP58557 167 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 GRB2P62993 217 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 FOXK1P85037 733 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 RAB11BQ15907 218 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 LCN10Q6JVE6 187 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 LRRC55Q6ZSA7 311 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 RADILQ96JH8 1075 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ZIM2Q9NZV7 527 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 E7ESA3 106 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 PBX2P40425 430 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 TDGQ13569 410 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SLC10A1Q14973 349 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SERPINA12Q8IW75 414 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 HDHD5Q9BXW7 423 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SLA2Q9H6Q3 261 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ZDHHC4Q9NPG8 344 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ACTR3BQ9P1U1 418 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 GLOD5A6NK44 160 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 PAN3Q58A45 887 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 NDUFAF5Q5TEU4 345 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 NATD1Q8N6N6 113 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 MUS81Q96NY9 551 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 A0A1W2PPV4 95 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 GGT3PA6NGU5 568 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SNAPINO95295 136 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 GRM5P41594 1212 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 TSFMP43897 325 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 RPL26P61254 145 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ACY1Q03154 408 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 PEA15Q15121 130 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 RABL3Q5HYI8 236 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 LRRC52Q8N7C0 313 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 CCDC71LQ8N9Z2 235 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 UBXN10Q96LJ8 280 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 HRH4Q9H3N8 390 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 SOX17Q9H6I2 414 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ZDHHC2Q9UIJ5 367 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ARHGEF28Q8N1W1 1705 aaKnown RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 MYOM1P52179 1685 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 H7C1Q1 480 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 FHP07954 510 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 TUBB1Q9H4B7 451 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 XPNPEP1Q9NQW7 623 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 OXSMQ9NWU1 459 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
LRRK1-202ENST00000525284 PLAGL1Q9UM63 463 aa13.14□□□□□ -0.31
LRRK1-202ENST00000525284 A0A1W2PS29 197 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 MANSC4A6NHS7 340 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 SLC7A4O43246 635 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 LRCH4O75427 683 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 SLC2A1P11166 492 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 HOXD8P13378 290 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 RABGGTBP53611 331 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 PTPRRQ15256 657 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms