RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 NIPAL2Q9H841 368 aa17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 TMEM161AQ9NX61 479 aa17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 TVP23BQ9NYZ1 205 aa17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 HCN2Q9UL51 889 aa17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 MGAT4BQ9UQ53 548 aa17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 CLCA3PQ9Y6N3 262 aa17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 KIAA0100Q14667 2235 aaKnown RBP17.32■□□□□ 0.36
PCDHB18P-201ENST00000524813 TRAV19A0A0A6YYK7 116 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 TMEM202A6NGA9 273 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 KPNA5O15131 536 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 LRRTM2O43300 516 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 IRS1P35568 1242 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 PRSS53Q2L4Q9 553 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 DCST1Q5T197 706 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 TRIQKQ629K1 86 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 FAM92BQ6ZTR7 304 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 COMMD6Q7Z4G1 85 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 PDZD3Q86UT5 571 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 RASGRP3Q8IV61 690 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 IQCF1Q8N6M8 205 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 SYT14Q8NB59 555 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR4M1Q8NGD0 313 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR52I1Q8NGK6 324 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 TTC9Q92623 222 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 KATNB1Q9BVA0 655 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 MKRN2Q9H000 416 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 POLR2J3Q9H1A7 115 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 GULP1Q9UBP9 304 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 SMLR1H3BR10 107 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 TLX2O43763 284 aaPredicted RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 ELAVL4P26378 380 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 IFNA8P32881 189 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR1D2P34982 312 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 OPRD1P41143 372 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 BDKRB1P46663 353 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 CAV3P56539 151 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 DSTNP60981 165 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 RPS25P62851 125 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 TAF12Q16514 161 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 OCLNQ16625 522 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 IER5LQ5T953 404 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR2AP1Q8NGE2 309 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 ASZ1Q8WWH4 475 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 C1GALT1C1Q96EU7 318 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 ZBED6CLQ96FA7 236 aaPredicted RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 COMMD3Q9UBI1 195 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 MALT1Q9UDY8 824 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 LRFN2Q9ULH4 789 aa17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 DIMT1Q9UNQ2 313 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-201ENST00000524813 HCN1O60741 890 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 TRIM3O75382 744 aaPredicted RBP17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR2B3O76000 313 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 RAB36O95755 333 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 SRPRAP08240 638 aaKnown RBP17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 TNNI3P19429 210 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 SPINT3P49223 89 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 MED27Q6P2C8 311 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 ARMCX6Q7L4S7 300 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 ANKRD33Q7Z3H0 272 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 LAPTM4BQ86VI4 370 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 SIX5Q8N196 739 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 Q8N402 240 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR52P1PQ8NH57 321 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 WDR48Q8TAF3 677 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 APOBEC4Q8WW27 367 aaKnown RBP17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 AP3S1Q92572 193 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 VOPP1Q96AW1 172 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 CRISPLD2Q9H0B8 497 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 RBFOX1Q9NWB1 397 aaKnown RBP17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 ING3Q9NXR8 418 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 CLEC4EQ9ULY5 219 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 A0A1W2PQ72 361 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 A0A1W2PRB8 838 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 OR2AG2A6NM03 316 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 PROM1O43490 865 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 PRKYO43930 277 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 SEMA7AO75326 666 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 PSIP1O75475 530 aaKnown RBP17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 SLC16A8O95907 504 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 PKLRP30613 574 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 CYP4F8P98187 520 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 PDE7AQ13946 482 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 REEP3Q6NUK4 255 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 MZT2BQ6NZ67 158 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 ZNF730Q6ZMV8 503 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 TMPRSS11BQ86T26 416 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 CCDC28AQ8IWP9 274 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 IL17RCQ8NAC3 791 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 C16orf78Q8WTQ4 265 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 NEIL2Q969S2 332 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 MED18Q9BUE0 208 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 NLKQ9UBE8 527 aa17.3■□□□□ 0.36
PCDHB18P-201ENST00000524813 LOC105371267A0A1B0GV96 52 aa17.29■□□□□ 0.36
PCDHB18P-201ENST00000524813 SGTAO43765 313 aa17.29■□□□□ 0.36
PCDHB18P-201ENST00000524813 SLCO2B1O94956 709 aa17.29■□□□□ 0.36
PCDHB18P-201ENST00000524813 TAS2R50P59544 299 aa17.29■□□□□ 0.36
PCDHB18P-201ENST00000524813 TARDBPQ13148 414 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms