RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 SNX4O95219 450 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 HPNP05981 417 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 FBXO45P0C2W1 286 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 MSH2P43246 934 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 TRPC1P48995 793 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 EEF1A1P68104 462 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 IGLV3-21P80748 117 aaPredicted RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 PPP2R2BQ00005 443 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 LAPTM5Q13571 262 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 HIST2H2ACQ16777 129 aaPredicted RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 NHSL2Q5HYW2 709 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 TEDDM1Q5T9Z0 273 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 PRAMEF20Q5VT98 475 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 EEF1A1P5Q5VTE0 462 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 VASNQ6EMK4 673 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 HIST2H2AA3Q6FI13 130 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 CXXC5Q7LFL8 322 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 SLC29A4Q7RTT9 530 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 ADAMTSL2Q86TH1 951 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 C9orf40Q8IXQ3 194 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 TCAIMQ8N3R3 496 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 LRRN4CLQ8ND94 238 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 FAM13CQ8NE31 585 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 SREK1Q8WXA9 508 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 MAGOHBQ96A72 148 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 ANKRD9Q96BM1 317 aaPredicted RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 CERS2Q96G23 380 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 ZFP3Q96NJ6 502 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 PELOQ9BRX2 385 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 MS4A12Q9NXJ0 267 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 NDRG3Q9UGV2 375 aa10.59□□□□□ -0.71
CCNC-218ENST00000524049 CNOT11Q9UKZ1 510 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 EIF3LQ9Y262 564 aaKnown RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
CCNC-218ENST00000524049 IQANK1A0A1B0GTG1 560 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 EEF1E1-BLOC1S5C9J1V9 151 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 CDC7O00311 574 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 EEF1E1O43324 174 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 CDH16O75309 829 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TRIM3O75382 744 aaPredicted RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 TRAPPC6AO75865 159 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TBX6O95947 436 aaPredicted RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 ZNF37AP17032 561 aaPredicted RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 CPN2P22792 545 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 SLC6A12P48065 614 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 CDK9P50750 372 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 RPP38P78345 283 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 PLIN5Q00G26 463 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 ILF2Q12905 390 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 RCAN2Q14206 197 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 NTRK2Q16620 822 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TMEM35AQ53FP2 167 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 PAGE2BQ5JRK9 111 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 Q5PR19 223 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TTC27Q6P3X3 843 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 SCIMPQ6UWF3 145 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 FRA10AC1Q70Z53 315 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 VN1R5Q7Z5H4 357 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TAGAPQ8N103 731 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 BBOF1Q8ND07 529 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TRIM58Q8NG06 486 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 OR10G3Q8NGC4 313 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 ZPLD1Q8TCW7 415 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 GRK7Q8WTQ7 553 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 ZNF592Q92610 1267 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 RHBDF1Q96CC6 855 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 WDR34Q96EX3 536 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 PTCD3Q96EY7 689 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 FBXL20Q96IG2 436 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 TRIB1Q96RU8 372 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 SECISBP2Q96T21 854 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 EFCAB11Q9BUY7 163 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 RBM24Q9BX46 236 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 PPANQ9NQ55 473 aaKnown RBP10.58□□□□□ -0.72
CCNC-218ENST00000524049 CTNNAL1Q9UBT7 734 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 IKZF3Q9UKT9 509 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 CAMK2AQ9UQM7 478 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 JMJD1CQ15652 2540 aa10.58□□□□□ -0.72
CCNC-218ENST00000524049 MAP1AP78559 2803 aaPredicted RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 ZNF469Q96JG9 3925 aaPredicted RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 SH3D21A4FU49 640 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 OR6C76A6NM76 312 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 H7C1Q1 480 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 SCELO95171 688 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 TMIGD3P0DMS9 266 aaPredicted RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 FPR1P21462 350 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 HIST1H1TP22492 207 aaPredicted RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 ATP5A1P25705 553 aaKnown RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 PCSK6P29122 969 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 GCKP35557 465 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 GGT5P36269 586 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 GDF5P43026 501 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 KCTD19Q17RG1 926 aaPredicted RBP10.57□□□□□ -0.72
CCNC-218ENST00000524049 AP5B1Q2VPB7 878 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 CDKL4Q5MAI5 379 aa10.57□□□□□ -0.72
CCNC-218ENST00000524049 CCDC137Q6PK04 289 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms