RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FTH1P02794 183 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 TSPAN8P19075 237 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 LCN1P31025 176 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 S100A5P33763 92 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 RORAP35398 523 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 MNDAP41218 407 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 VAMP7P51809 220 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 CDH6P55285 790 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 YWHAGP61981 247 aaKnown RBP eCLIP3.69□□□□□ -1.82
SKP1-209ENST00000522552 YWHAEP62258 255 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 HEPACAMQ14CZ8 416 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 EXT1Q16394 746 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 TMEM119Q4V9L6 283 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 PHLDA2Q53GA4 152 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 BEX5Q5H9J7 111 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 WASH2PQ6VEQ5 465 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 Q75L30 129 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 VRK2Q86Y07 508 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 ADHFE1Q8IWW8 467 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 SLC38A6Q8IZM9 456 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 ZNF565Q8N9K5 539 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 OR4C5Q8NGB2 326 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 OR6M1Q8NGM8 313 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 OR1L4Q8NGR5 311 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 OR5R1Q8NH85 324 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 FGFBP3Q8TAT2 258 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 NDNFQ8TB73 568 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 CCDC107Q8WV48 283 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 SCFD1Q8WVM8 642 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 DNAAF4Q8WXU2 420 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 ELMO1Q92556 727 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 TSACCQ96A04 125 aaPredicted RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 RBM41Q96IZ5 413 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 TSNARE1Q96NA8 513 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 TRNT1Q96Q11 434 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 MTMR9Q96QG7 549 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 CYTH2Q99418 400 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 KRT12Q99456 494 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 KCNS3Q9BQ31 491 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 NSRP1Q9H0G5 558 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 KLHL31Q9H511 634 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 DHX33Q9H6R0 707 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 AAMDCQ9H7C9 122 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 MCCC2Q9HCC0 563 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 MRPL47Q9HD33 250 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 MIOXQ9UGB7 285 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 MTRF1LQ9UGC7 380 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 MRTO4Q9UKD2 239 aaKnown RBP3.69□□□□□ -1.82
SKP1-209ENST00000522552 VANGL2Q9ULK5 521 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 RNF24Q9Y225 148 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 ATP10DQ9P241 1426 aa3.69□□□□□ -1.82
SKP1-209ENST00000522552 CARMIL1Q5VZK9 1371 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 WASHC1A8K0Z3 465 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 H7C1Q1 480 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 J3KR12 359 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 BTN3A3O00478 584 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 WNT9BO14905 357 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 ARPC1BO15143 372 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 MDM4O15151 490 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 EIF3HO15372 352 aaKnown RBP eCLIP3.68□□□□□ -1.82
SKP1-209ENST00000522552 ZIC3O60481 467 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 ANP32DO95626 131 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 HPRP00739 348 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 CST1P01037 141 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 MCF2P10911 925 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 HNRNPH3P31942 346 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 AVPR1AP37288 418 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 HAAOP46952 286 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 NPY2RP49146 381 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 PPIAP62937 165 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 UBE2IP63279 158 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 NAAAQ02083 359 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 IRF8Q02556 426 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 GABPAQ06546 454 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 ASPHQ12797 758 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 ILKQ13418 452 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 GPR176Q14439 515 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 NCF4Q15080 339 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 C6orf226Q5I0X4 101 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 PDZK1Q5T2W1 519 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 OR2A2Q6IF42 318 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 CDC42EP5Q6NZY7 148 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 TMEM107Q6UX40 140 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 CEACAM20Q6UY09 585 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 NLRP9Q7RTR0 991 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 SLC29A4Q7RTT9 530 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 POLNQ7Z5Q5 900 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 PEG10Q86TG7 708 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 PRUNE1Q86TP1 453 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 PARGQ86W56 976 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 MICU2Q8IYU8 434 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 LGI2Q8N0V4 545 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 KRT222Q8N1A0 295 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 TMEM99Q8N816 258 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 NOA1Q8NC60 698 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 DDHD1Q8NEL9 900 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 TRPV1Q8NER1 839 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 OR5AU1Q8NGC0 362 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 OR11H4Q8NGC9 324 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 PPP4R1Q8TF05 950 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms