RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RAB15P59190 212 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 DCDP81605 110 aaKnown RBP20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 DUSP2Q05923 314 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 NKAIN1Q4KMZ8 207 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 MSRB3Q8IXL7 192 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 ANKRD9Q96BM1 317 aaPredicted RBP20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 CLPTM1LQ96KA5 538 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF681Q96N22 645 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 ULBP3Q9BZM4 244 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 L3MBTL1Q9Y468 752 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 SNX8Q9Y5X2 465 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 SPTBN4Q9H254 2564 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 GVINP1Q7Z2Y8 2422 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC30A4O14863 429 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 PLD2O14939 933 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 CTNSO60931 367 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 PPP2R1BP30154 601 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 GPC1P35052 558 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 SOAT1P35610 550 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 EIF3IQ13347 325 aaKnown RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 MLC1Q15049 377 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 RUNDC3AQ59EK9 446 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 RABL3Q5HYI8 236 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 MFSD4BQ5TF39 518 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 ARHGAP24Q8N264 748 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 LRRC25Q8N386 305 aaPredicted RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 GOT1L1Q8NHS2 421 aaPredicted RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 AURKBQ96GD4 344 aaPredicted RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 ANKRD27Q96NW4 1050 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 OR1F2PQ96R84 312 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 TAAR9Q96RI9 348 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 MKKSQ9NPJ1 570 aaPredicted RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC22A11Q9NSA0 550 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 PACSIN3Q9UKS6 424 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 CDV3Q9UKY7 258 aaKnown RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 PRPF19Q9UMS4 504 aaKnown RBP20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 B3GALT1Q9Y5Z6 326 aa20.09■□□□□ 0.81
R3HCC1-208ENST00000522012 EP300Q09472 2414 aaPredicted RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 SCN3AQ9NY46 2000 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 TRBV5-3A0A0A0MS03 114 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 C15orf38-AP3S2A0A0A6YYH1 394 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 OR2W5A6NFC9 320 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 CFAP73A6NFT4 308 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 ZCCHC18P0CG32 403 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 CPMP14384 443 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 NQO1P15559 274 aaKnown RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 PORP16435 677 aaPredicted RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 HOXB9P17482 250 aaPredicted RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 PTGER1P34995 402 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 MTPNP58546 118 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 BTG2P78543 158 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 TARDBPQ13148 414 aaKnown RBP eCLIP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 CEBPEQ15744 281 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 COX15Q7KZN9 410 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 ARPINQ7Z6K5 226 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC15A3Q8IY34 581 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 CLEC4FQ8N1N0 589 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 TRIML2Q8N7C3 387 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 SUN3Q8TAQ9 357 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 RAB3IPQ96QF0 476 aaPredicted RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 THUMPD3Q9BV44 507 aaKnown RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 CXorf36Q9H7Y0 433 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 CMTM6Q9NX76 183 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 TMEM181Q9P2C4 612 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF282Q9UDV7 671 aaPredicted RBP20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 NEUROG3Q9Y4Z2 214 aa20.08■□□□□ 0.81
R3HCC1-208ENST00000522012 DCHS1Q96JQ0 3298 aa20.08■□□□□ 0.8
R3HCC1-208ENST00000522012 MEN1O00255 615 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 PDE5AO76074 875 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 BMP10O95393 424 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 AGXTP21549 392 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 IL10P22301 178 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 RORAP35398 523 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 CDK9P50750 372 aaKnown RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 HSD17B7P56937 341 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 STX4Q12846 297 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 GAB1Q13480 694 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 SPDYE7PQ495Y7 208 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 VWA2Q5GFL6 755 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 C3orf38Q5JPI3 329 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 ZC3H7AQ8IWR0 971 aaKnown RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 PRSS58Q8IYP2 241 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 RNF148Q8N7C7 305 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 OR8J3Q8NGG0 315 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 WDR36Q8NI36 951 aaKnown RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 UTP4Q969X6 686 aaKnown RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 TMEM125Q96AQ2 219 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 PHF12Q96QT6 1004 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 SH3GL1Q99961 368 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 ZPBPQ9BS86 351 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 ASPSCR1Q9BZE9 553 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 MMADHCQ9H3L0 296 aaPredicted RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 NEUROD4Q9HD90 331 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 LANCL2Q9NS86 450 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 IFT80Q9P2H3 777 aaPredicted RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 CTSFQ9UBX1 484 aa20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 COL27A1Q8IZC6 1860 aaPredicted RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 A0A1W2PNU3 283 aaPredicted RBP20.07■□□□□ 0.8
R3HCC1-208ENST00000522012 KLK3P07288 261 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms