RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 BRAT1Q6PJG6 821 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 TSSK4Q6SA08 328 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KDELC1Q6UW63 502 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 C4orf22Q6V702 233 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SLC36A4Q6YBV0 504 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ERN2Q76MJ5 926 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PRPF39Q86UA1 669 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SATL1Q86VE3 508 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 LONP2Q86WA8 852 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KMT5CQ86Y97 462 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KLHDC8BQ8IXV7 354 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RNF113BQ8IZP6 322 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF567Q8N184 647 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 HDDC3Q8N4P3 179 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CADM4Q8NFZ8 388 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 OR6K2Q8NGY2 324 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KIF18AQ8NI77 898 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC110Q8TBZ0 833 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 METTL6Q8TCB7 284 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 GANCQ8TET4 914 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PIH1D2Q8WWB5 315 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RAB7BQ96AH8 199 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 FAM131CQ96AQ9 280 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ECHDC3Q96DC8 303 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ERLEC1Q96DZ1 483 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PPP1R16AQ96I34 528 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CAPZA3Q96KX2 299 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 HARBI1Q96MB7 349 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RUNDC3BQ96NL0 473 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 AGAP3Q96P47 875 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PPP1R2P1Q96PQ5 205 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 BARD1Q99728 777 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 OMDQ99983 421 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CHCHD6Q9BRQ6 235 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 HAUS8Q9BT25 410 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM121Q9BTD3 319 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 AP1M1Q9BXS5 423 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 POLR1EQ9GZS1 481 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SLC25A51Q9H1U9 297 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 GBA3Q9H227 469 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 NEUROG2Q9H2A3 272 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ZDHHC6Q9H6R6 413 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ATP13A3Q9H7F0 1226 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 DYRK4Q9NR20 520 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KRT84Q9NSB2 600 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 FBXL12Q9NXK8 326 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 C1RLQ9NZP8 487 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SEPT10Q9P0V9 454 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 BCCIPQ9P287 314 aaKnown RBP eCLIP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KLHL8Q9P2G9 620 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CTNNAL1Q9UBT7 734 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 FAM153AQ9UHL3 310 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 HAO1Q9UJM8 370 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KCNS2Q9ULS6 477 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RPL26L1Q9UNX3 145 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ERVK-11Q9UQG0 969 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 NCKAP1Q9Y2A7 1128 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 LSM4Q9Y4Z0 139 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CHD7Q9P2D1 2997 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 DENND4AQ7Z401 1863 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 C2orf16Q68DN1 1984 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 GREB1Q4ZG55 1949 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 IGHV1OR15-9A0A0B4J2B8 117 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 LOC285095A0A1B0GVY8 99 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 LILRA5A6NI73 299 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ERI2A8K979 691 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 C10orf142B7Z368 130 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TAF4O00268 1085 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PLK4O00444 970 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KPNA3O00505 521 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TRAFD1O14545 582 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SEC14L5O43304 696 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TNFSF14O43557 240 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 RHOBTB1O94844 696 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PGLSO95336 258 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PIGNO95427 931 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SEMA4FO95754 770 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 AGTP01019 485 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 IFNB1P01574 187 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KRT14P02533 472 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 UGT2B4P06133 528 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ZSCAN5DPP0CG00 497 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CDH1P12830 882 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ADRB3P13945 408 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ETS1P14921 441 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PSMA4P25789 261 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PSMB4P28070 264 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ADRA1AP35348 466 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 DRD3P35462 400 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ACTN2P35609 894 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ARL3P36405 182 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 FDFT1P37268 417 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 P2RY2P41231 377 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CD86P42081 329 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 METAP1P53582 386 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CLNS1AP54105 237 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TAS2R38P59533 333 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ARF3P61204 181 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 RPS3AP61247 264 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms