RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 SCO1O75880 301 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 CCNDBP1O95273 360 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 LGI1O95970 557 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 HLA-DQB1P01920 261 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 FABP1P07148 127 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 HMBSP08397 361 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 OR56A5P0C7T3 313 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 PRKAR1AP10644 381 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 IFI30P13284 250 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF250P15622 560 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 CD6P30203 668 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ASMTP46597 345 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 GCLMP48507 274 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 NRIP1P48552 1158 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF134P52741 427 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 YWHAEP62258 255 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TFAMQ00059 246 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 FGL1Q08830 312 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SLAMF1Q13291 335 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SHHQ15465 462 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 MEP1AQ16819 746 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TRIM60Q495X7 471 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ARHGAP15Q53QZ3 475 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 C9orf50Q5SZB4 431 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 C1orf220Q5T0J3 134 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 LCN1P1Q5VSP4 162 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 FAM160B1Q5W0V3 765 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF425Q6IV72 752 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 LIN54Q6MZP7 749 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 CAPN13Q6MZZ7 669 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SLC27A4Q6P1M0 643 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 FUT10Q6P4F1 479 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 C5orf46Q6UWT4 87 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TMPRSS11AQ6ZMR5 421 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 Q6ZSN1 163 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 UTS2BQ765I0 119 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 PTAR1Q7Z6K3 402 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TRIM69Q86WT6 500 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 STPG2Q8N412 459 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TBC1D19Q8N5T2 526 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 LRRC17Q8N6Y2 441 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TTC29Q8NA56 475 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ATG16L2Q8NAA4 619 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 C7orf57Q8NEG2 295 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 OR5K1Q8NHB7 308 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 WDR36Q8NI36 951 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 CYP2W1Q8TAV3 490 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ITFG1Q8TB96 612 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SPPL2BQ8TCT7 592 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF431Q8TF32 576 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 STYXQ8WUJ0 223 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 BADQ92934 168 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 HGDQ93099 445 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SPSB4Q96A44 273 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 OTULINQ96BN8 352 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 MARK4Q96L34 752 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 CCDC115Q96NT0 180 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 TRNT1Q96Q11 434 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 OR5M11Q96RB7 305 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 FIZ1Q96SL8 496 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SDHCQ99643 169 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 RBBP8Q99708 897 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 MRPL57Q9BQC6 102 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ZNF436Q9C0F3 470 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 GABARAPL1Q9H0R8 117 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 MAGEH1Q9H213 219 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 OR51M1Q9H341 326 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 GHITMQ9H3K2 345 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 PLAC1Q9HBJ0 212 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 MSL2Q9HCI7 577 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 EQTNQ9NQ60 294 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 KRT84Q9NSB2 600 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 UFSP2Q9NUQ7 469 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 RDH8Q9NYR8 311 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 SEC14L4Q9UDX3 406 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 PURGQ9UJV8 347 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 ENTPD4Q9Y227 616 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 CROCCQ5TZA2 2017 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
CTNNA1-225ENST00000520865 A0A0C4DFX4 3053 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 A0A096LPK6 155 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 A0A1B0GTQ1 180 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 LOC390937A0A1W2PQ73 354 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 FAM149AA5PLN7 773 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 LACTBL1A8MY62 500 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 PTGES3LE9PB15 166 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 UPK1AO00322 258 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 ACKR2O00590 384 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 PRMT5O14744 637 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 BCKDKO14874 412 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 DSCR3O14972 297 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 PPM1DO15297 605 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 B4GAT1O43505 415 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 EIF1BO60739 113 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 ZFPL1O95159 310 aa6.3□□□□□ -1.4
CTNNA1-225ENST00000520865 POP4O95707 220 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms