RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 STKLD1Q8NE28 680 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 STEAP2Q8NFT2 490 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TRIM58Q8NG06 486 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 HCAR2Q8TDS4 363 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SUSD6Q92537 303 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 NXPE2Q96DL1 559 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CNDP1Q96KN2 507 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 RPGRIP1Q96KN7 1286 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 UBAC1Q9BSL1 405 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 MRPL13Q9BYD1 178 aaKnown RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 DPEP2Q9H4A9 486 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 GORASP2Q9H8Y8 452 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 ACTR8Q9H981 624 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 PALMDQ9NP74 551 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 HPS4Q9NQG7 708 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 GTSE1Q9NYZ3 720 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SATB2Q9UPW6 733 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 NCKAP1Q9Y2A7 1128 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 C2CD2Q9Y426 696 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 COLEC10Q9Y6Z7 277 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CUX2O14529 1486 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SNED1Q8TER0 1413 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 NPC1L1Q9UHC9 1359 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ABCC4O15439 1325 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 A0A1B0GU03 582 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ANKRD30BLA7E2S9 258 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ERI2A8K979 691 aaKnown RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 SNURFLB1AK76 121 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ZNF732B4DXR9 585 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 HHLA1C9JL84 531 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ADAM12O43184 909 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 SAP30O75446 220 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 TBX6O95947 436 aaPredicted RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 PROS1P07225 676 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 HIST1H2AGP0C0S8 130 aaPredicted RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 PATE4P0C8F1 98 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 SFTPCP11686 197 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 IL4RP24394 825 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 DPP4P27487 766 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 FCGR2BP31994 310 aaPredicted RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR1D2P34982 312 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 SLC1A3P43003 542 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 SP3Q02447 781 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 MFGE8Q08431 387 aaPredicted RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 HSPA14Q0VDF9 509 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 FUT7Q11130 342 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 MEF2DQ14814 521 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 TPD52L1Q16890 204 aaPredicted RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 CMPK2Q5EBM0 449 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 CCDC183Q5T5S1 534 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 TMEM207Q6UWW9 146 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 C17orf64Q86WR6 236 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 ZCCHC7Q8N3Z6 543 aaKnown RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 TEX26Q8N6G2 289 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR5AP2Q8NGF4 316 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR5T2Q8NGG2 359 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR2T11Q8NH01 316 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 OR4C3Q8NH37 302 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 GATAD1Q8WUU5 269 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 HIST1H2ACQ93077 130 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 PINX1Q96BK5 328 aaKnown RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 LRR1Q96L50 414 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ANP32EQ9BTT0 268 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ZSCAN5AQ9BUG6 496 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 WRAP53Q9BUR4 548 aaKnown RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 TMEM117Q9H0C3 514 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 LRRC40Q9H9A6 602 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 SLC52A3Q9NQ40 469 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 MAN2C1Q9NTJ4 1040 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 HACD3Q9P035 362 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 PILRAQ9UKJ1 303 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 CHMP2BQ9UQN3 213 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.53□□□□□ -1.84
SQLE-204ENST00000520493 SPATA31D1Q6ZQQ2 1576 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 NOTCH2Q04721 2471 aa3.53□□□□□ -1.84
SQLE-204ENST00000520493 ZMYM6O95789 1325 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 RNF123Q5XPI4 1314 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 C15orf38-AP3S2A0A0A6YYH1 394 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 A0A0U1RQV5 110 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 LGALS8O00214 317 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 SLC1A7O00341 560 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 PDXKO00764 312 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 FPGTO14772 594 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 NUDT21O43809 227 aaKnown RBP3.52□□□□□ -1.85
SQLE-204ENST00000520493 TXNDC12O95881 172 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ASNSP08243 561 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 MYOGP15173 224 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 RPL35AP18077 110 aaKnown RBP3.52□□□□□ -1.85
SQLE-204ENST00000520493 DRD5P21918 477 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 CTNNA2P26232 953 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 PTPN4P29074 926 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 PRDX2P32119 198 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ADRA1AP35348 466 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 PEX19P40855 299 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 PTGER3P43115 390 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 GEMP55040 296 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms