RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TNFRSF17Q02223 184 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 TFF3Q07654 80 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 PMPCAQ10713 525 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 UBAP2Q5T6F2 1119 aaKnown RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 ADGRD1Q6QNK2 874 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 MEX3BQ6ZN04 569 aaKnown RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 GK5Q6ZS86 529 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 FAM47EQ6ZV65 393 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 TRILQ7L0X0 811 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 C9orf40Q8IXQ3 194 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 L3MBTL4Q8NA19 623 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 DOK4Q8TEW6 326 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 ASB5Q8WWX0 329 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 RND1Q92730 232 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 UCN3Q969E3 161 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 UCK2Q9BZX2 261 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 IPPKQ9H8X2 491 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 ACTR8Q9H981 624 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 PROK2Q9HC23 129 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 PRM3Q9NNZ6 103 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 PNPLA3Q9NST1 481 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 SACM1LQ9NTJ5 587 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 TUBA8Q9NY65 449 aaPredicted RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 COPS7AQ9UBW8 275 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 PHF11Q9UIL8 331 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 RNF11Q9Y3C5 154 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 ANGPTL3Q9Y5C1 460 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 LIPGQ9Y5X9 500 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 FREM3P0C091 2139 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 HIVEP1P15822 2718 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 A0A096LPK6 155 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 A0A0A6YYD5 115 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 OR14I1A6ND48 311 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 ACOT7O00154 380 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 UGDHO60701 494 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 TOXO94900 526 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 SIX3O95343 332 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 ALDOAP04075 364 aaKnown RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 P04436 131 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 CELA3AP09093 270 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 GFAPP14136 432 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 ALOX15P16050 662 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 TLX1P31314 330 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 PIGAP37287 484 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 NEK2P51955 445 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 RAP1GDS1P52306 607 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 NUP107P57740 925 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 CUL3Q13618 768 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 GTF2H2Q13888 395 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 SLC10A1Q14973 349 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 CPSF6Q16630 551 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 SLC22A10Q63ZE4 541 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 GTF2H2CQ6P1K8 395 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 GOLGA7Q7Z5G4 137 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 MYLK4Q86YV6 388 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 CCDC71Q8IV32 467 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 ST13P4Q8IZP2 240 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 PLD6Q8N2A8 252 aaKnown RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 FAM109AQ8N4B1 249 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 SLC15A4Q8N697 577 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 OR5M9Q8NGP3 310 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 WDR20Q8TBZ3 569 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 FBXL20Q96IG2 436 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 CENPKQ9BS16 269 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 LRRC1Q9BTT6 524 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-205ENST00000519623 ZNF358Q9NW07 568 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
CSMD1-205ENST00000519623 ATP6AP2A0A1C7CYW4 349 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 NKX2-6A6NCS4 301 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 GLOD5A6NK44 160 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 FOXE1O00358 373 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 OR7A17O14581 309 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 BCKDKO14874 412 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 SUSD5O60279 629 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ATP6AP2O75787 350 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 CLPSP04118 112 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 FAM58BPP0C7Q3 252 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 CAPN3P20807 821 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ACVR2AP27037 513 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 TYK2P29597 1187 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 CHRNB4P30926 498 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 BUD31P41223 144 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 PLIN5Q00G26 463 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ZNF267Q14586 743 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 SPRED3Q2MJR0 410 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 RTL6Q6ICC9 239 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ACAD11Q709F0 780 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 PAQR8Q8TEZ7 354 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 REPS1Q96D71 796 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 SPACA9Q96E40 222 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ART5Q96L15 291 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 TTYH2Q9BSA4 534 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 FUT8Q9BYC5 575 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ACSS3Q9H6R3 686 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms